Haemophilus influenzae KR494 (serotype f): HifGL_000064
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Entry
HifGL_000064 CDS
T02839
Symbol
deaD
Name
(GenBank) DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HifGL_000064 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hik03019
]
HifGL_000064 (deaD)
03009 Ribosome biogenesis [BR:
hik03009
]
HifGL_000064 (deaD)
Enzymes [BR:
hik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HifGL_000064 (deaD)
Messenger RNA biogenesis [BR:
hik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HifGL_000064 (deaD)
Ribosome biogenesis [BR:
hik03009
]
Prokaryotic type
rRNA helicases
HifGL_000064 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGV10901
LinkDB
All DBs
Position
complement(65320..67164)
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AA seq
614 aa
AA seq
DB search
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIPHLLSGNDVLGMAQTGSGKTAAFA
LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACEQFVKYAHGSRIVTLYGGQRYDIQLRA
LKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENH
QTALFSATMPEPIRRITKRFMNDPKEVKIKVNNENAPDIEQSCWYVHGVRKNEALLRFLE
VEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIE
HLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLEQYRSLLEDLFTADQDQEDIA
AAMLMLLQGKQKLILPPDPPMEKRRRERNECGDRRENPRSAERRGERKGYGNPRPMDLYR
IEVGRADGVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFGKTRV
LNKQMQMSFLGAVKSDNSRGGDDFNGKRKGRGGDFRGERGRNERNGDNRGNRKFNEKSNR
TFSDKPRRDRRSSF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaattacttttaatgacttaggcttacctgagttcatcttaaaagctgtt
tctgacttaggttttgaaaccccttctccaattcaacaagcttgtatcccacatttgctc
agtggcaatgatgtgctaggtatggcacaaacgggtagtggtaaaaccgctgcttttgca
ctgcctttattagcacaaatcgatccaagtgaaaaacatccacaaatgttagtaatggca
cctactcgcgaacttgctattcaagttgccgatgcgtgcgaacaatttgttaaatatgct
catggctcccgcattgttaccctatatggcgggcaacgttatgacatccaacttcgtgca
ttaaaacaaggcgcacaagtagttgtgggtacacctggtcgtattcttgaccatattcgt
cgcggcacattaaatctttctgaacttcgttttatcgtattagatgaagccgatgaaatg
ctacgtatggggttcattgatgatgtagaaaccgtcatggctgaattaccagaaaatcat
caaactgcgttattctctgcaacaatgcctgaaccgatccgtcgtattacgaaacgtttt
atgaatgatccgaaagaagtgaagatcaaagttaataacgaaaatgctccagatattgag
caaagttgttggtatgtgcacggcgtgcgtaaaaacgaagctcttcttcgtttcttagaa
gtggaagattttgatgccgcaattatttttgctcgcactaaaactggcacgttagacatt
acagaactacttgaaaaaaatggtttccgttccgccgcacttaatggcgatatgacacaa
caattacgcgaacaaaccctcgatcgtttacgtaacggcagtttagatattgtagtagca
accgatgtggctgctcgtggtattgatattgaacgtatcagccttgtggtaaactacgac
attccgctggatgcagaatcttatgtacatcgaattggccgtactggtcgtgcaggtcgt
tctggtcgtgctttattattcgttgaacctcgtgagcgtcgtttacttcgtaatattgaa
cacctaatgaaaaaaggtatcaatgaagtagaattgccaaatcatcttgtgttacaagaa
tgccgccgcaaaaaattcgttgcaaaaattacgaaacaacttgagcatcacgatttagaa
caatatcgtagtttattagaagacttattcacagccgatcaagatcaagaagatattgct
gcagcaatgttaatgttgttacaaggtaaacaaaaattaattcttccacctgatccgcca
atggaaaaacgtcgtcgtgaacgtaatgaatgcggtgatcgccgtgaaaatccacgttca
gctgaacgtcgtggcgaacgtaaaggctacggaaatccacgaccaatggatttatatcgt
atcgaagtcggtcgtgcagatggtgtagaagttcgccatatcgttggtgcaattgctaat
gaaggcgatattaacagccgttatattggtcatattaaactttatgatgattacactacc
gttgaattgccacaaggtatgccgaaagaattattgcaacaattcggaaaaacacgcgta
ttgaataaacaaatgcaaatgtctttcttaggcgcagtaaaatccgataattcccgtggc
ggtgatgattttaacggtaaacgtaaaggccgtgggggcgatttccgtggagaacgcgga
cgtaatgaacgaaatggtgacaatcgtggaaatcgtaaatttaatgaaaaaagtaaccgc
acttttagcgacaaaccacgccgtgatcgtagatcatcattctaa
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