Haemophilus influenzae KR494 (serotype f): HifGL_000130
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Entry
HifGL_000130 CDS
T02839
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hik03009
]
HifGL_000130 (srmB)
Enzymes [BR:
hik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HifGL_000130 (srmB)
Ribosome biogenesis [BR:
hik03009
]
Prokaryotic type
rRNA helicases
HifGL_000130 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AGV10967
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All DBs
Position
complement(131544..132863)
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AA seq
439 aa
AA seq
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MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEARDVLGSAPTGTGKTATFLL
PALQHLLDYPRRKPGSPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
DVCNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVTHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILEGLEPRTKPPKDGEVKSVSKKQKARIKEKREEKKKTEAKKKVKL
RHKDTKNIGKRRKSSNSNI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccaatttgaacaattcgatctttctcctgagcttttaaaggcacttgag
aaaaaaggttattctcgtccaacagctattcaaatggaagccattcctgccgcaatggaa
gcgcgtgatgtattaggctctgcaccaacgggaacagggaaaacggctacttttttatta
cctgcgctacaacatttattggattatccacgccgtaaaccgggctcaccgcgtattttg
gtattaacgccaacccgtgaattggcaatgcaagtggcagaacaagcggaagaattagcg
cagtttacccatttaaatattgcgacaattacaggtggcgtggcgtatcaaaatcacggt
gatgtgtgcaataccaatcaagatttggtggtggctacgcctggccgtttattgcaatac
attaaggaagaaaattttgattgccgttccgttgaaatgctgatttttgacgaagccgat
agaatgttacaaatgggatttggacaagatgcggaaaaaattgcggctgaaacccgttgg
cggaaacaaaccttgttgttttctgcaaccttagaaggagagttattagtcgatttcgcg
gagcgtttgttgaatgatcctgtgaaagtagatgcggaaccaagccgtcgagagagaaaa
aaaatcaaccaatggtattaccatgcagacagcaatgaacacaaaatcaaattgctcgcg
cgttttattgaaactgaagaagtaacccgtggaattgtgtttattcgtcgtcgtgaagat
gcacgagaactttctgaaacattgcgtaaacgaggcattcgttctgcgtatttagaaggt
gaaatggcacaaactcaacgtaataatgcgattgataaattgaaatcaggtattgtgacg
gtattggttgcaacagatgtggctgcgcgtggtattgatattgacgatgtaactcacgtg
atgaattttgatttgccctatagtgcggatacttatttgcatcgaattggacgtacagcg
cgagcaggtaaaaaaggcacagcggtctcttttgtcgaagcccatgattacaagttacta
ggtaaaatcaaacgttatactgaggaaattttaaaggcacgcattttagagggtttagag
cctcgcactaagccaccaaaagatggtgaagtgaaatctgtcagcaaaaaacaaaaggca
cgcattaaagaaaaacgtgaagaaaagaaaaaaacagaggcaaagaaaaaagtaaaattg
cgtcataaggatacgaaaaatatcggcaaacgacgcaagtcaagcaacagtaatatttaa
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