Haemophilus influenzae KR494 (serotype f): HifGL_000155
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Entry
HifGL_000155 CDS
T02839
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik03030
DNA replication
hik03430
Mismatch repair
hik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HifGL_000155 (dnaE)
03430 Mismatch repair
HifGL_000155 (dnaE)
03440 Homologous recombination
HifGL_000155 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hik03032
]
HifGL_000155 (dnaE)
03400 DNA repair and recombination proteins [BR:
hik03400
]
HifGL_000155 (dnaE)
Enzymes [BR:
hik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HifGL_000155 (dnaE)
DNA replication proteins [BR:
hik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HifGL_000155 (dnaE)
DNA repair and recombination proteins [BR:
hik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HifGL_000155 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AGV10992
LinkDB
All DBs
Position
155925..159353
Genome browser
AA seq
1142 aa
AA seq
DB search
MIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVRFYGEMLSSGMKPIIGADVKVKSTL
CGDEYFDLTLLAKNNEGYKNITLLLSKAYQRGYNDLPYIDQDWLIEHREGVIILSGGTQG
DVGKKLLKENVAEIESAVAFYQEFFADHFYLALTRTGKPDEERYIQAALKLAKSHGLPLV
ATNDVMFLKSDDFEAHEIRVAIHDGYTLDDPKRPKYYTSQQYFRSEDEMCKLFADIPSAL
ENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGLEERLAFLFPDEKVRLEK
RPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYALKIT
DLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAETYGRGAVSQIITFGTMA
AKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLAKAFEAEPQLQTAYDSDEEVQALIDM
ARKLEGVTRNAGKHAGGVVISPTLITDFSPLYCDNEGLHPVTHFDKNDVEYAGLVKFDFL
GLRTLTIIKWALDMINVRMVREGKSRVDIAAIPLDDPESFELLKRSETTAVFQLESRGMK
DLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEVSYPDAEYQHESLKPIL
EPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMAKQRSVFKEGAVKNGVD
GELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPAEFMAAVMTSEMDNTDKI
VGLYDECLRMGLKVTPPDINVGKHHFSVNEQGEIVYGIGAIKGVGEGPIEALVTARNEGG
IFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSKNLEDALRASDQHAKDEA
IGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLYLSSHPVSRYLKELSHYT
STRLKDLAPNRRGQISTVAGLLVSSRIAITKKGNRLGIATLDDRSGRLDLTLFGESLEQF
GEKLQKDTVVVASGQVSFDDFSGGLKMAVRELMTLDEARSRYVKSLAISLSEHQITPSFI
KQLKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDEILTELVNLLGESAVELE
FE
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgattgacagtattgtcaaagtgaaacctttagtgaaagcctgtgcagctaatgaaatg
gtcgcaatgggattaacggattttactaatttttgtggtgtggtgcgtttttatggcgaa
atgctttcttcgggtatgaagcctattatcggggctgatgtaaaagtaaaaagcacattg
tgtggcgatgaatactttgatcttactttgctggctaaaaataatgaaggctataaaaat
attactttattgttatcaaaagcttatcagcgaggttataacgatttaccttatattgat
caagattggttaattgaacatcgtgagggcgtgattattttatcagggggaacgcaaggc
gatgtgggtaaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttt
tatcaagaattttttgctgatcatttttatcttgcacttacgcgtactggcaaaccagat
gaagaacgttatatccaagcagcattaaaattagctaaaagtcatggattgcctttggtg
gcgacgaacgatgtgatgtttttgaaatctgatgattttgaggctcatgaaattcgcgta
gcgattcacgatggctatactttagacgatcctaaacgtccgaaatattatacctcacag
caatatttccgcagcgaagacgaaatgtgtaagctgtttgctgacattccttccgctctt
gaaaatactttattaattgcgcaacgttgtagtgtcactttgcgtctcggtcaatatttc
ttacctcaatttccaactggcgatttaagtacagaagatttcttagtacaaaaatccaaa
gagggcttggaagaacgtttagcttttttattccctgatgaaaaagtgcggttagaaaaa
agaccaaaatatgatgaacgcttgcaggttgagctggatgtgattaaccaaatgggattc
ccaggttatttcttaatcgtaatggaatttattcaatggtctaaggataacaatattcct
gttggaccaggtcgtggttctggggcgggttcattagtggcttacgcactcaaaatcacg
gatttagatccgctagaattcgatttactttttgaacgtttcttaaatccagaacgtgtg
tctatgcccgatttcgacgtggatttctgtatggatggtcgcgatcgcgtgattgaacac
gttgcagaaacttatggtcgtggagcggtatcacaaattattacctttggtacgatggca
gcaaaagcggttattcgagatgtgggacgcgtattggggcatccttacggctttgtggat
cgtatttctaaattgattcctctagatccgggtatgacgcttgccaaagcatttgaagcc
gagccgcaattacagactgcttacgatagcgatgaagaagtacaagcgttgattgatatg
gcacgtaaactggagggcgtaacccgtaatgcaggtaaacatgcaggtggcgtggtcatt
tcgccaaccttaattactgatttttcaccactctattgtgataatgaaggcttacatcca
gttactcactttgataaaaatgatgtggaatatgcggggcttgtgaaattcgacttctta
ggcttgcgtactctcactatcattaaatgggcattggatatgattaatgttcgtatggtg
cgtgaaggcaagtctcgagtagatattgccgccattccacttgatgatcctgaatctttt
gaattacttaaacgttccgaaaccaccgccgtgttccagttggaatcgcgtggtatgaaa
gatttgatcaaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattg
ttccgtcctggcccgttgcaatcgggcatggtagataactttatcgaccgtaaacatggg
cgagaagaagtatcttaccctgacgcagaatatcaacatgaaagcttgaaacctattctt
gagccgacttacggcattattttgtatcaagaacaagtgatgcaaattgcgcaagtgttg
gctggttatacattgggtggagcagacttattgcgtcgagcgatggggaaaaagaaacca
gaggaaatggcaaagcagcgttctgtgtttaaagagggggcggtaaaaaacggtgtggat
ggtgagctttccatgaagattttcgacttggtggaaaaatttgctggctatggttttaat
aaatctcactccgctgcttatgccttggtgtcttaccaaaccctttggctcaaaacccat
ttccctgcggaatttatggctgcagtgatgacatctgaaatggataatacggataaaatc
gtaggtttgtacgacgaatgtttgcgtatgggcttaaaagtaacgccaccagatattaat
gtcggcaagcaccattttagcgtcaatgaacaaggcgaaattgtatatggtattggcgcg
attaaaggcgtgggggaaggtccgattgaagcacttgtgacggcaagaaatgaagggggg
attttcaaagatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgc
acctttgaaagcctaattatgtcgggtgcctttgataaattaggcccacatcgcgccgca
ctttctaagaatttagaagatgcgcttagagcttctgatcaacatgcgaaagatgaagca
ataggacaaacagatatgttcggcgtgctgactgaaacccatgaagacgtagaaaatgcc
tatgctaatacaccaccttacactgaaaaacaaattcttgatggcgaacgagaaaccttg
gggctttatttaagcagccatcctgttagccgttatttgaaagaactttcccattacaca
tcgacgcgcttgaaagatcttgcaccaaatcgccgtggacaaattagcactgtggcggga
ttattggtctcatcacgaattgcaatcacaaaaaaaggcaatcgcttaggcattgctaca
ttagacgatcgttctggtcgcttagatttaacattatttggcgaaagcctagagcaattt
ggtgagaagttacaaaaagataccgttgtggttgcatcagggcaagtgagctttgatgat
ttttctggcggattaaaaatggcggtgcgagagttaatgaccttagacgaagcacgttct
cgttatgtcaaatccttagctattagtctttctgagcatcaaattacaccaagtttcatt
aaacaacttaaagcattacttgagccagtgagtggtggaaccttgccgattaacgtgtat
tatcaaagtccgaaaggtcgtgcgttgttacgtttaggcgtgcaatggtcaattattcca
acagatgaaattctgacggaattggtgaatttacttggcgaaagtgcggtggaattagag
tttgaataa
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