Haemophilus influenzae KR494 (serotype f): HifGL_000317
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Entry
HifGL_000317 CDS
T02839
Symbol
rpoD
Name
(GenBank) aspartate ammonia-lyase
KO
K03086
RNA polymerase primary sigma factor
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HifGL_000317 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hik03021
]
HifGL_000317 (rpoD)
Transcription machinery [BR:
hik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HifGL_000317 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
DNA_ligase_A_N
CDC45
DNA_pol_phi
HTH_20
Csm2_III-A
BUD22
Motif
Other DBs
NCBI-ProteinID:
AGV11154
LinkDB
All DBs
Position
complement(320716..322608)
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AA seq
630 aa
AA seq
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MEKNQQSTAEQYSEQIEQLMELGRTQGYLTFAEINDLLPEDAIDPEYYDKLLQTLQNDAG
IPVLDEAPESDDMMLSDTIPDEDAVEEATQILSNVESEIGRTTDPVRMYMREMGTVDLLT
REDEISIAKRIEEGIDEVQTSIAAYPEALNGLLKNYDDVEKGNFRLTDLITGFVDPNAEI
EEHNGLDEDFSDEDEDEDEDDEEEGSSNADVEDNESESTSDSSDSDNSIDPEVAREKFQQ
LREQHSKTLAVIEKHGRSGKRAQDQIALLGEIFKQFRLVPKQFDLLVLSMKEMMKRVRYE
ERQLQKILVDIAGMPKDDFEKIITTNGSNREWVTKALKSSKPWAKRLIKYEDRIYEALNN
LAITEENTKLTITQMRNICDAVARGEQKARRAKKEMVEANLRLVISIAKKYTNRGLQFLD
LIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKL
NRISRQLLQEMGREATPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFI
EDSTLELPLDSATAQSLKVATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVT
RERIRQIEAKALRKLRHPSRSETLRSFLDE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaacaatctacggctgaacaatattcagaacaaattgagcaattgatg
gagctaggtcgtacacaagggtatttaacttttgctgaaatcaatgacttattgcccgaa
gatgctattgatcctgaatattacgacaagttgctacaaacgttgcaaaatgatgcaggc
atccctgtgttagatgaagcaccagaaagcgatgatatgatgttgagtgataccatccct
gatgaagatgcagtggaagaagcaactcaaattctttctaatgtagaatctgaaatcggt
cgaacaacggatcctgtccgtatgtatatgcgtgaaatgggaacagttgatcttcttact
cgtgaagatgaaatcagcattgcaaaacgtattgaagaagggattgatgaagttcaaacc
tctatcgcagcctatcctgaagcattaaatggattactaaaaaactatgatgatgtagaa
aaaggtaatttccgtttgaccgatttaattacaggttttgttgatccaaatgccgaaata
gaagaacacaacggacttgatgaagacttttctgatgaagatgaagatgaagatgaagat
gatgaagaagaaggatcgagtaatgcagatgtggaagacaatgaatcagaatccacatca
gattcaagcgactctgataacagtattgatcctgaagttgctcgcgaaaaatttcagcaa
ttaagagaacagcactctaaaacccttgctgttattgaaaaacacggtcgctctggaaaa
cgcgctcaagatcaaattgcactacttggcgaaatttttaaacaattccgtttagtgcca
aaacaatttgatttactcgttctatcaatgaaagaaatgatgaaacgtgtacgttatgaa
gaacgtcagctacaaaaaatattagtggatatagcaggaatgccaaaggatgattttgaa
aaaattattactactaatggcagtaacagagaatgggtaacaaaagcattaaaatctagc
aaaccttgggctaaacgtttaattaaatatgaagatcgtatttatgaagccttaaacaat
ctagcgataacagaagaaaatactaaacttaccattacgcaaatgcgtaacatttgcgat
gcagtcgcacgaggcgaacaaaaagcacgccgagctaaaaaagaaatggttgaagctaac
ttacgtttagtaatttctatcgcgaaaaaatacacaaatcgaggtttacaattcttagat
ttaattcaagaagggaatatcggtttaatgaaagcggtagataaatttgaatatcgacgt
ggttacaaattctctacctatgcaacttggtggattcgtcaagcaatcactcgctctatt
gcggatcaagcgcgtacaatccgtattcctgtgcatatgattgaaacgatcaataaactt
aatcgtatttctcgccagttattacaagaaatgggacgtgaagcaacaccagaagaattg
gcagaacgtatgggaatgccagaagataaaatccgtaaagtactgaaaattgcaaaagag
ccaatttcgatggaaacacctattggcgatgacgatgattcgcatttaggggattttatt
gaagattcaaccttagaacttcctcttgattctgccacagcacaaagtttaaaagttgca
actcacgaggtgcttgaaggtctgacaccacgtgaagcaaaagtattacgtatgcgtttt
ggtatcgatatgaataccgaccatacgcttgaagaagtgggtaaacaattcgatgtaaca
cgcgaacgcattcgtcaaattgaagcaaaagcattacgtaaattacgtcatcctagccgt
tctgaaacactgagaagttttttagatgaatag
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