Haemophilus influenzae KR494 (serotype f): HifGL_000917
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Entry
HifGL_000917 CDS
T02839
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik03410
Base excision repair
hik03430
Mismatch repair
hik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HifGL_000917 (recJ)
03430 Mismatch repair
HifGL_000917 (recJ)
03440 Homologous recombination
HifGL_000917 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hik03400
]
HifGL_000917 (recJ)
DNA repair and recombination proteins [BR:
hik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HifGL_000917 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HifGL_000917 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HifGL_000917 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGV11738
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Position
918175..919902
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AA seq
575 aa
AA seq
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MKKLIKRREIPIGNSVSNHPLLDRLYRARHIQNTKELDRTLKSMLNPNQLYGIEQAVNLL
VEAYQQQQKIVIVGDFDADGATSTALSVLALRQLGFSDVDYLVPNRFEQGYGLSIPVAEM
AIEKGVQLLMTVDNGVSSFDGVAFLKDKGIRVLVTDHHLPPETLPPADAIVNPNLSQCGF
PSKSLAGVGVAFYLMLAVRAKFRELGIFTAETQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLMRIRARHCRLGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL
LLANEMSKARELALDLDQLNQTRKEIEAGMKLEAIKICQNLTALFKELPYGITLYQPDWH
QGVLGIVSSRIKDQYHRPVIAFAQDSEGILKGSARSIEGLHMRDVLERIHSQHPNMILKF
GGHAMAAGLSIREEHFDDFQHIFNQTVADWLDEEHLQGVIWTDGELNSNEFNLETAELIK
SVGTWGQGFPEPCFDGEFKILDQRAIGQNKNHLKMLLEPKQGGVLLDAIAFNINTRLYPD
LSIKQARLAYKLDINEFRGNRSLQLLVDYIEPIDE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaacttatcaaacgccgtgaaattccaattggaaattctgtttcaaatcatccc
ttattagatcgcctttatcgcgctcgtcatattcaaaacaccaaagaattagaccgcact
ttgaaatcaatgctcaatccaaatcagttatatggcattgagcaagctgtaaatttatta
gttgaagcctatcaacaacagcaaaaaattgtgattgttggggattttgatgctgatggt
gcaaccagcacagcattgagtgtgctggctttaagacaacttggcttttctgatgtggat
taccttgtgccaaatcgatttgaacaaggttatggcttgagtattcctgtggctgaaatg
gcgattgaaaagggtgttcagttgttaatgacggtggataacggcgtttcgtcttttgac
ggtgtggcatttttgaaagacaaaggcattcgagttttagtcacggatcatcatttaccc
cccgaaactttgccgccagccgatgcgattgttaatcctaatttaagtcagtgtggtttt
ccttcaaaatccttagcgggcgttggtgtggcgttttatttgatgttagccgtacgagca
aaatttcgtgaactcggtatttttacggcagaaacacaacctaattttactgatttgctc
gatctagtggcactaggcactatagctgatgttgttcctttggatcaaaataatcgtatc
cttgcttatcaaggtttaatgcgtatccgtgctagacactgccgtcttggtattattgcg
ttggcagaagtggctaaccgtaatgtagagcagtttacttcaagtgatctcggtttttgt
atcggacctcgtttaaatgcggcagggcgtttagataatatgtcgattggggtagagctt
ttgctggcgaacgaaatgtcaaaagccagagaattagctttagatctcgatcagctcaat
caaacgcgtaaagaaattgaagcgggtatgaagcttgaggcaataaaaatttgtcaaaat
cttaccgcactttttaaagagttaccctatggtattacgctttatcaacctgattggcat
caaggcgtattaggcattgtgtcatcaaggattaaggatcaatatcatcgtccagtgatt
gcctttgcacaagatagtgagggaattttgaaaggttccgcgcgttctattgaggggtta
catatgcgtgatgttttagagcgtattcattcgcaacatcctaatatgattttaaaattt
ggcggacacgcaatggcggcaggcttgagtattcgcgaagaacattttgatgatttccaa
catatttttaatcaaaccgttgccgattggcttgatgaagaacatctacaaggcgtaatt
tggacagatggcgaactaaattcaaatgaatttaatcttgaaacggcagagctgataaaa
tcggtaggcacttgggggcaagggtttcctgagccttgctttgatggcgaatttaaaatt
ttagaccagcgtgcaattgggcaaaataaaaatcatctaaaaatgttgctagaaccgaaa
cagggcggggttttattagatgcgattgcgtttaatattaatacaagattgtatcctgat
ctttcaattaaacaggctcgtttagcttataaattagatattaacgaatttcgtggcaat
cgtagcctacaattattggtagattatattgagccgatagatgagtga
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