Haemophilus influenzae KR494 (serotype f): HifGL_001239
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Entry
HifGL_001239 CDS
T02839
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hik03016
]
HifGL_001239 (truB)
Enzymes [BR:
hik01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HifGL_001239 (truB)
Transfer RNA biogenesis [BR:
hik03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HifGL_001239 (truB)
Prokaryotic type
HifGL_001239 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGV12044
LinkDB
All DBs
Position
complement(1246393..1247313)
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AA seq
306 aa
AA seq
DB search
MSRPRKRWRDVDGVFLLDKPQGMSSNDIMQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDAEGQVVETREVHVETQQILTALEQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELNFIDYNAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRTAVADYPVAEMMPIDELQLLAESFPLSELDHLLLPTDT
AVSKLPTLHLDTEQSKAIGFGQRVKFANEQQLSGQVRLFSAENLFLGVALIDGNIIRPQR
LITQSA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacctcgtaaacgctggcgtgatgttgatggagtgtttttgttggataaacca
caaggcatgtcatcaaatgacattatgcaaaaggtaaagcgtttatttcaagcgaacaaa
gctgggcatactggcgcgctcgatccgttggcaacggggatgttgccgatttgcttgggc
gaagcaactaagttttcacaatttttgcttgatgcagataagcgttatcttgttacggca
aaattaggcgagcgtaccgatacttccgatgcggaagggcaagtggtggaaacgcgtgaa
gttcatgttgaaactcagcaaattttgaccgcacttgaacaatttcgtggcgatatttta
caagtgccgacgatgttttctgcactaaaacataacggcaagccgctttatgaatacgcg
cgccaaggtattacggttgagcgtgaggcgcgtccaattacgatttttgaactcaatttt
attgactataatgcgccttatttaactttagaagtgcattgttcaaaaggcacttatatt
cgcaccttagtagatgatttgggtgaagtgctaggttgtggcgcacatgtgacaatgtta
cgccgtacagccgtagcggattaccccgtagcagaaatgatgccaatcgatgagttacaa
ttgcttgctgaaagttttccgttaagtgaattggatcatctattactgccaactgatacc
gctgtaagtaaattgcccactttgcatttggatacagagcagagtaaagccattggtttt
ggtcagcgagtgaaatttgctaacgaacagcaattaagcggtcaagtgcggttattttca
gcggagaatttattcttaggtgtagccttaattgatggaaatataattcgcccacaacgg
ttaatcacacaatccgcataa
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