Haemophilus influenzae KR494 (serotype f): HifGL_001408
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Entry
HifGL_001408 CDS
T02839
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hik03016
]
HifGL_001408 (rnb)
Enzymes [BR:
hik01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HifGL_001408 (rnb)
Transfer RNA biogenesis [BR:
hik03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HifGL_001408 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
TRAM
Motif
Other DBs
NCBI-ProteinID:
AGV12202
LinkDB
All DBs
Position
complement(1428555..1430534)
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKAYGFLECDKKNYFIAPPSMKKVMHGDKIK
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDNKLQVLVDHPSINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDEFAPWWVTLARHEQSRYPAQGVEH
YEMLDQKTRENLTALHFVTIDSESTMDMDDALYIEPITQNSVQTGWKLVVAIADPTAYIA
LDCQIEQEAKQRCFTNYLPGFNIPMLPRELSDELCSLIANETRPALVCYIETDLAGNITA
KPHFVSAYVQSKAKLVYNNVSDYLDQTQNVWQPETPEIAQQIHWLHQFTKARIQWRKTHS
LLFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNT
HSGFDKKYLENAHNFLMANLANEQNQAELAERYSVENLATLNGYCQMRHDIDHLESDYVA
LRLRRYLTFSEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPCEKPQN
EVLARLQEARRQNRLVERDIADWLYCRYLSPKVAENVEFNAEVQDVMRAGLRVQLLENGA
SLFIPAATLHNNKEEIQLNPDELALYIKGDRTYKIGDMVKVKLTEVKETTRSIVGEIVQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatcctctactcgcacaacttaaacaacaaatccacgacagcaaagaa
caggttgagggcgtggtaaaaagcacagataaagcctacggctttttagagtgcgataaa
aaaaactatttcatcgcaccgccatcaatgaaaaaagtgatgcacggcgacaaaatcaaa
gccaccattgaaaaacaaggcgacaaagaacaagccgagccagaagccttaattgagcca
atgctcacacgttttatcgcaaaagtgcggttcaataaagacaacaaattacaagtgctg
gtcgatcacccaagcattaatcagcccattggcgcgcaacaggcgaaatccgttaaagaa
gaactgcaagagggcgattgggtcgtcgcaaatttaaaaacccatccattgcgtgacgat
cgctttttctacgccaccattaatcaatttatttgccgagctgatgacgaatttgcccct
tggtgggtcacattagcacgtcacgaacaatcccgctatcccgcgcaaggcgtagaacat
tatgaaatgttagatcaaaaaacacgtgaaaatctgaccgcacttcattttgtaaccatt
gattccgaaagcacaatggatatggacgacgctttatatatcgaacccatcacacaaaac
agcgtgcaaacaggctggaaactcgtggtcgccattgccgatcccaccgcttacatcgcc
ttagattgccaaattgaacaagaagcgaaacagcgttgcttcacaaattatttaccgggc
tttaacattccaatgttaccccgtgaattatcagatgaattatgctctttaatcgccaat
gaaacccgccccgcactggtttgttatatcgaaaccgatcttgcaggcaacatcacagcc
aaaccgcattttgtttccgcttatgtgcaatctaaagccaaactggtttacaacaacgtc
tcagactacttagaccaaacccaaaacgtgtggcagccagaaacgccagaaattgcacaa
caaattcattggttacatcaatttaccaaagcacgcatacaatggcgtaaaacccattcc
ttactctttaaagaaaagcctgattacgcctttgtgctggcagaaaacggcaaagtgcaa
gaaatcaaagcagaatatcgccgcattgccaatcaaattgtggaagaagcaatgattatc
gccaacatctgtgctgcccaatttttacacgaacaggcaaaaacaggcattttcaacacc
cacagcggttttgataaaaaatacttagaaaatgcgcacaatttcttaatggcaaattta
gccaatgaacaaaatcaagcagaactggcagaacgttattcagtagaaaacttagcaaca
ttaaacggctattgccaaatgcgccacgacatcgaccatctagaaagtgattatgtagcc
ctacgcctacgccgttatttaaccttctccgaatttaaatcagaattagcaccgcacttc
gggctggggctagagggctatgccacttggacatccccaattcgtaaatattctgacatg
gttaatcatcgcttaatcaaagccgtgctggcaaaacagccttgcgaaaaaccacaaaat
gaagttttagcacgtttgcaagaagcacgccgccaaaatcgcctcgtcgaacgtgatatt
gccgattggctatattgccgttatctttcgccgaaagtggctgaaaatgtggaatttaat
gcagaagtgcaagatgtaatgcgggcaggcttacgcgtacaactgctcgaaaatggtgca
tcgctattcattcctgctgccaccttgcacaacaacaaagaagaaatacaactaaaccct
gatgaactcgctctttacataaaaggcgaccgcacttataaaatcggcgacatggtaaaa
gtgaaactcacagaagtgaaagaaaccacacgcagcattgtcggcgaaatcgttcaataa
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