Haemophilus influenzae F3047 (nontypeable): HICON_00830
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Entry
HICON_00830 CDS
T01400
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03410
Base excision repair
hil03430
Mismatch repair
hil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HICON_00830
03430 Mismatch repair
HICON_00830
03440 Homologous recombination
HICON_00830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_00830
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HICON_00830
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HICON_00830
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HICON_00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBY87368
UniProt:
A0AAV2U5K9
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All DBs
Position
complement(1778844..1780442)
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AA seq
532 aa
AA seq
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MLNPNQLYGIDQAVNLLVEAYQQQQKIVIVGDFDADGATSTALSVLALRQLGFSDVDYLV
PNRFEQGYGLSIPVAEMAIEKGVQLLMTVDNGVSSFEGIAFLKEKGIRVLVTDHHLPPET
LPPADAIVNPNLSQCHFPSKSLAGVGVAFYLMLAVRAKFRELGIFTAETQPNFTDLLDLV
ALGTVADVVPLDQNNRILAYQGLMRIRARHCRPGIIALAEVANRNVEQFTSSDLGFCIGP
RLNAAGRLDNMSIGVELLLANEMSKARELALDLDELNQTRKEIEAGMKLEAIKICQNLTA
LFKELPYGITLYQPDWHQGVLGIVSSRVKDQYHRPVIAFTQDSEGILKGSARSIEGLHMR
DVLERIHSQHPNIILKFGGHAMAAGLSIREEYFADFQHLFNQTIADWLDEEHLQGIIWTD
GELNSNEFNLETAELIKSVGTWGQGFPEPCFDGEFKILDQRAIGQNKNHLKMLLEPKQDG
GLLDAIAFNIDTRLYPDLSIKQARLAYKLEINEFRGNRSLQLLVDYIEPIDE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatccaaatcaattatatggcattgatcaagcggtaaatttattagtggaggct
taccaacaacagcaaaaaatagtgattgttggggatttcgatgctgatggtgcaactagc
acagcattgagtgtgctcgctttaagacaacttggtttttctgatgtagattaccttgtg
ccaaatcgatttgaacaaggttatggtttgagtattccagtggctgaaatggcgattgaa
aagggcgttcagttattaatgacggtggataacggcgtttcatcttttgaaggcattgca
tttttgaaagaaaaaggcattcgagttttagtcacggatcatcatttaccgcccgaaact
ttgccgccagccgatgcgattgttaatcctaatttaagtcagtgtcatttcccttcaaaa
tctttagctggcgttggtgtggcattttatttgatgctggcggtgcgcgcaaaatttcgt
gaactcggtatttttactgcagaaacacaacctaattttactgatttgctcgatctagtt
gcattgggtactgtcgctgatgttgtgcctttagatcaaaataatcgtatccttgcttat
caaggtttaatgcggattcgtgctagacactgccgtcctggtattattgcgttggctgaa
gtggccaaccgcaatgttgaacagtttacctcaagtgatctcggtttttgtatcgggcct
cgtttaaatgcggcagggcgtttagataatatgtcgattggggtggagcttttgctggcg
aacgaaatgtcaaaagccagagaattagctttagatcttgacgaactcaaccaaacacgt
aaagaaattgaagcaggtatgaagcttgaggcaataaaaatttgtcaaaatcttaccgca
ctttttaaagagttaccctatggtattacgctttatcagcccgattggcatcaaggcgta
ttaggcattgtttcatcaagggttaaggatcaatatcatcgtccagtgattgcctttacg
caagatagtgagggaattttgaaaggttccgctcgttctattgaggggttacatatgcgc
gatgttttagagcgtattcattcgcaacatcctaatataattttaaaatttggcggacac
gcaatggctgctgggttgagtattcgagaagaatattttgcggatttccaacatcttttt
aatcaaaccattgccgattggcttgatgaagaacatctgcaaggcataatttggacagat
ggcgaactgaattcaaatgaatttaatcttgaaacggcagagttgataaaatcggtaggc
acttggggacaagggtttcctgagccttgctttgatggcgaatttaaaattttagatcag
cgcgcgattgggcaaaataaaaatcatctaaaaatgttgctagaaccgaaacaagatggg
gggttattagatgcgattgcgtttaatattgatacaagattgtatcctgatctttcaatt
aaacaggctcgtttagcctataaattagagattaacgaatttcgtggcaatcgtagccta
caattattggtagattatattgagcctatagatgagtga
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