Haemophilus influenzae F3047 (nontypeable): HICON_04540
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Entry
HICON_04540 CDS
T01400
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HICON_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_04540
Enzymes [BR:
hil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HICON_04540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HICON_04540
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HICON_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_6
Zn_ribbon_TiaS
DZR
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
CBY85917
UniProt:
A0AAV2U1L2
LinkDB
All DBs
Position
196771..197586
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AA seq
271 aa
AA seq
DB search
MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELITLKNVKIVDLTRRAKYLI
IHTEKGYIIGHLGMSGSVRIVPQDSAIDKHDHIDIVVNNGKLLRYNDPRRFGAWLWTENL
DDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGVGNIYANESLFICG
IHPLKLAKNLTRNQCFSLVNTIKDVLRKAIIQGGTTLKDFLQPDGRPGYFAQELLVYGNK
DKPCPKCGGKIESLIIGQRNSFFCPKCQKRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagtcgaaactgcactacgtggtattagcccttatcttaagaat
tttacgattgagaaagttgtcgtgcgccaacctaaattgcgctgggctgtatcagaggaa
ttgataacgctaaaaaatgtaaaaattgtcgatctcactcgtcgagcaaaatatttgatt
attcacacggaaaaaggctatatcatcgggcatttgggcatgtcaggttcggtgcgaatt
gtgccacaggatagtgcaatagataaacatgatcatattgatattgtagtgaataatggc
aagttattacgctataacgatcctcgccgtttcggtgcttggttgtggacggagaatcta
gatgactttcatcttttcttaaagttaggccctgaaccactttctgatgaatttaatgca
gaatatttattcaaaaaatctcgtcaaaaatctaccgcacttaaaactttcttgatggat
aacgctgtggtagtgggcgttggaaatatttatgcgaatgaaagtttgtttatttgtggc
attcatccccttaaactcgctaaaaatttgacgcgcaatcaatgtttctctttagtgaac
acgattaaagatgttttgagaaaagccattattcaaggtggaacaacacttaaagatttt
ttacagcccgatggtcgcccaggttattttgcacaagaattattggtatatggcaataaa
gataaaccttgtccaaagtgcggtggaaaaattgaaagtttaattattggacagcgtaat
agtttcttttgcccgaaatgtcagaaaaggggttag
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