Haemophilus influenzae F3047 (nontypeable): HICON_06580
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Entry
HICON_06580 CDS
T01400
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03030
DNA replication
hil03430
Mismatch repair
hil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HICON_06580
03430 Mismatch repair
HICON_06580
03440 Homologous recombination
HICON_06580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hil03032
]
HICON_06580
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_06580
Enzymes [BR:
hil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HICON_06580
DNA replication proteins [BR:
hil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HICON_06580
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HICON_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBY86121
UniProt:
A0AAV2U0V8
LinkDB
All DBs
Position
400030..403509
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVRFYDEMLS
SGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITLLLSKAYQRGYNDLPYIDQDW
LIEHRDGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALSRTGRPNQER
YIQAALKLAERCDLPLVATNDVMFLNAEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYF
RSEEDMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLAFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LQTAYDSDEEVRALINMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDMINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRLVFKEGAEKNGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVTARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVASRIAMTKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVIVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQFKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaacctcgcttcgtccatcttcgcacacacacagatttttcgatgattgac
agtatcgtcaaagtgaaacctcttgtgaaagcttgtgctgccaatgaaatggttgctatg
ggattaacggattttactaatttttgtggtgtggtgcgtttttatgacgaaatgctttct
tcgggtatgaagcctattatcggggcagatgtaaaagtaaaaagcccattatgtggcgat
gaatactttgatcttactttgctagctaaaaataatgaaggctatagaaatattacttta
ttgttatcaaaggcttatcaacgcggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgcgacggcgtgattattttatcagggggaacgcaaggcgatgtaggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgccgatcatttttatttagcattaagtcgtacaggtcgcccaaatcaagaacgt
tacattcaagcagcgttgaaattagcagaacgttgtgatttaccattggtcgcaactaat
gatgtgatgtttttgaatgcagaggattttgaagcccacgaaattcgcgtagcgattcac
gatggctatactttagacgatcctaaacgtccgaaatgttatacctcacagcaatatttt
cgtagtgaagaagatatgtgtaagctatttgcagacattccttccgctctcgaaaatacc
ttattaattgcgcaacgttgtagtgtgactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtgcaaaaatccaaagagggcttg
gaagaacgtttagcttttttattccctgatgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgcttgcaagttgagctagatgtaattaaccaaatggggttcccaggttat
ttcttgatcgtaatggaatttattcaatggtctaaggataacgatattccagtagggcca
ggtcgtggttctggtgcgggttcattagtggcttatgcattaaaaatcactgatttagat
ccgttagagtttgatttgctatttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggacggtcgcgatcgcgtgattgagcacgttgcagaa
acctatggccgtggcgcggtatcacaaattattacctttggtacaatggcggcgaaagcg
gttattcgagatgtagggcgagtgctggggcatccgtatggtttcgttgatcgtatttcg
aaattgattcctcccgatccaggtatgacgcttgccaaagcgtttgaggccgagccgcaa
ttacagactgcctacgatagcgatgaagaagtgcgagcattgattaacatggcgcgcaag
ctggaaggtgtgacacgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgattttgcaccgctctattgtgataatgaaggcttacatccggttactcac
tttgataaaaatgatgtggaatatgcagggcttgtgaaatttgacttcctaggcttgcgt
actctcactatcattaaatgggcattggatatgattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcctgaatcttttgaattactt
aaacgttccgaaaccaccgctgtgttccagttggaatcacgaggtatgaaagatttgatc
aaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattgttccgtccg
ggtccgttacaatcgggtatggtagataactttatcgaccgtaaacatgggagagaagaa
gtatcttaccctgacgcagaatatcaacatgcaagtttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaggtgttggctggctat
acgctgggtggggctgacttattgcgtcgagcaatgggtaaaaagaaaccagaagaaatg
gcaaaacagcgtttagtgtttaaagagggggctgagaaaaacggtattgatggcgagcta
tctatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tctgctgcttatgccttggtgtcttaccaaactctttggcttaaaactcatttccctgca
gaatttatggctgcagtgatgacatctgaaatggataatacggataaaatcgtaggtttg
tacgacgaatgtttgcgtatgggcttaaaagtgacgccaccagatattaatatcggaaaa
caccattttagcgtcaatgaacaaggcgaaattgtgtatgggattggcgcgattaaaggc
gtgggggaaggcccgattgaagcacttgtgacggcaagaaatgaaggggggattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgtacttttgaa
agcctaattatgtcgggtgcctttgataaattaggcccacatcgcgccgcactttctaag
aatttggaagatgcacttagagcttccgatcagcatgcgaaagatgaagcaatgggacaa
acggatatgttcggtgtgctgactgaaacccatgaagacgtggaaaatgcctatgctaat
acaccgccttataccgaaaaacaaatccttgatggcgaacgagaaaccttggggctttat
ttaagtagccatcctgttagccgttatttgaaagaactttctcattacacatcaacgcgg
ttgaaagatctcgcaccaaatcgccgtggacaaattagcactgtggcggggctagtcgtg
gcatcgagaattgcgatgacgaaaaaaggcaatcgtctaggtattgcaacattggacgat
cgttcaggtcgcttagatttaacattatttggtgaaagcctagaacaatttggtgagaaa
ttacaaaaagatacggtgattgttgcttcagggcaggtcagctttgatgatttctctggt
ggcttgaaaatgacggtgcgcgagttaatgaccttagatgaggctcgttctcgttatgtc
aaatccttggctattagtctttctgagcatcaaattacaccaagtttcattaaacaattt
aaagcattacttgagccagtgagtggtggaacattgcctattaacgtgtattatcaaagt
ccgaaaggtcgtgcgttgttacgtttaggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttactcggcgaaagtgcagtggaattagagtttgaataa
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