Haemophilus influenzae F3047 (nontypeable): HICON_09040
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Entry
HICON_09040 CDS
T01400
Name
(GenBank) RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HICON_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hil03021
]
HICON_09040
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_09040
Enzymes [BR:
hil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HICON_09040
Transcription machinery [BR:
hil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HICON_09040
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HICON_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
CBY86369
UniProt:
A0AAV2U3E4
LinkDB
All DBs
Position
691340..695368
Genome browser
AA seq
1342 aa
AA seq
DB search
MGYSYSEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQKDPEGQQGLEAAFRSVFPIV
SNNGYTELQYVDYRLEEPEFDVRECQIRGSTYAAGLRVKLRLVSYDKESSSRAVKDIKEN
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTEEILNLFFDKITFEIAGDKLLMT
LVPERLRGETASFDIEANGKVYVERGRRITARHIKALEKDNISQVVVPSEYILGKVASKD
YVDLESGEIICPANGEISLETLAKLAQAGYTTIETLFTNDLDYGPYISETLRVDPTYDKT
SALYEIYRMMRPGEPPTPESSEVLFNNLFFSAERYDLSTVGRMKFNRSLAFPEGEGAGIL
SNEDIIAVMRKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS
LGDLDAITPQDLINPKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHNTHYGRLCPIETPEGPNIGLINSLSAFARTNDYGFLETPYRKVVDGQVT
EEIEYLSVIDEANYIIAQANSNLDENNRFTDAFVTARGERGESGLYKPEDIHYMDVSTQQ
VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAK
RGGTVQYVDASRIVIKVNEDETIAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINR
GEVLADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCV
ARDTKLGSEEITADIPNVGESALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRALEIEEMQLREAKKD
LTEELEILEAGLFARVRHLLISSGADAAQLDNLDRAKWLEQTIADEEKQNQLEQLAEQYE
ELRKEFEHKLEVKRKKIIKGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKI
NPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAKGIGDQINAMLKQKQEVE
KLRGYIQKAYDLGNGSQKVDLSTFTDEEVLRLAENLRKGLPVATPVFDGADEAEIKELLK
LGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVSGNQHMDPGTP
ESFNVIMKEIRSLGLNIELDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgggttactcctattctgaaaaaaaacgaattcgtaaagatttcggtaaacgtccgcaa
gttttaaatgttccttatttattaaccattcagttggattcttttgataaatttattcaa
aaagatcctgaaggtcagcaaggtttagaagcggcattccgttctgtattccctattgtc
agtaataatggctatacagaattacaatatgtagattatcgtttagaagagccagagttt
gatgtacgtgagtgccaaattcgtggctcaacttatgcagcaggcttacgtgtaaaatta
cgtttagtgagctacgataaagaatcttcttcacgcgcagttaaagatattaaagaaaat
gaagtttatatgggggaaatcccattaatgacggataacggtacttttgtaattaatggt
accgagcgtgttatcgtttcacaattacaccgtagtccaggtgtattctttgattctgac
aaaggtaaaacccattcttcaggtaaagtgctttataacgcacgcattattccttaccgt
ggttcttggttagattttgaattcgatccaaaagataacttatttgcgcgcattgaccgt
cgtcgtaaattaccggcaacaatcattcttcgtgcattaggctacaccactgaagaaatc
ttaaacttattctttgataaaattacctttgaaatcgctggcgataaattgttaatgact
ttagtgccagaacgtttacgtggtgaaacggcttcttttgatattgaagcaaatggcaaa
gtgtatgttgaacgtggtcgtcgcatcactgctcgtcacattaaagcattagaaaaggat
aatatctcacaagtagttgtgccttctgaatatattttaggtaaagttgcgtcgaaagat
tatgttgatttagagtctggcgaaattatttgtcctgcaaatggcgaaatttcgttagaa
accctcgcaaaattagcacaagctggttacaccacgatcgaaactttatttactaatgat
ttagattatggtccatatatttctgaaacgctacgtgtcgatccaacttatgacaaaact
agtgcgctttacgaaatttatcgtatgatgcgtccgggcgagccaccaacaccagaatct
tcagaagtgttattcaataatttattcttctctgcagaacgttatgatttatctacagta
ggtcgtatgaagttcaaccgttctttagcttttccagaaggggaaggtgcgggtatttta
agcaatgaagatattattgcggtaatgcgtaaattgatcgacatccgtaatggtcgtggc
gaagtagacgatattgaccatttgggtaaccgtcgtatccgtagcgtgggcgaaatggct
gaaaaccaattccgtatcggtttagtgcgtgttgaaagagcggtcaaagaacgtctatct
ttaggcgatttagatgcgatcacgccacaagacttaattaacccgaaaccgatttctgcg
gcagtaaaagaattctttggttcttcacagctttcgcaatttatggatcaaaacaaccca
ttgtcagaagtgacacacaaacgtcgtatttctgcattaggtccaggcggtttaacgcgt
gagcgtgcaggctttgaagtgcgtgacgtacataatactcactatggtcgtttatgtccg
attgaaacccctgaaggtccaaacatcggtttgatcaactcactttctgcttttgcacgt
actaatgattatggtttcttagaaacaccatatcgtaaagtggttgatggtcaagttact
gaagaaattgaatacttatctgtaattgatgaagcaaactacatcattgcacaggcaaac
tcaaacttagacgaaaataaccgttttactgatgctttcgttactgctcgtggtgaacgt
ggtgaatctggtttatataaacctgaagatattcactatatggatgtttcgacacaacaa
gtggtatctgttgcggctgcattaattccattccttgagcatgacgatgcgaaccgtgcg
ttgatgggtgcgaacatgcaacgtcaagcagttccaacattacgtgcggataaaccatta
gttggtacaggtatggaaaaaccaatcgcacttgactcaggtgttgcggttgttgcaaaa
cgtggtggtaccgttcagtacgttgatgcgtctcgtattgtgattaaagtaaatgaagat
gaaaccattgcaggtgaagccggtattgatatttataacttaatcaaatatacccgttct
aaccaaaatacttgtattaaccaaattccttgtgtgaatttaggcgatccaatcaatcgt
ggtgaagtattagcagatggtccttcaactgatttgggggaacttgcattaggtcaaaac
attcgtgtggcgtttatgccttggaatggttataactttgaagactcaatgttagtttct
gaacgtgtcgttcaacaagaccgttttactacaatccatattcaagaattatcttgtgta
gcgcgtgatactaaattaggttcagaagaaattacggcagatattccaaacgtaggggag
tcagcattaagtaaacttgatgaatctggtattgtttatgttggtgcagaggttaaaggt
ggcgatatcttagtgggtaaagtaacccctaaaggcgaaacgcaattaaccccagaagaa
aaattgttacgtgcaatctttggtgaaaaagcctctgatgttaaagattcttcattacgc
gtgccaaatggtacatcaggtacggttattgatgttcaagtctttactcgtgatggtgta
gaaaaagataaacgtgcattagaaattgaagaaatgcaacttcgtgaagcgaaaaaagat
ttaactgaagagttagagattttagaagctggcttatttgctcgtgttcgtcatcttctt
atttctagtggtgctgatgcagcgcaattagacaacctagatcgcgctaaatggttagaa
caaaccattgcagatgaagaaaaacaaaatcaattagaacagcttgctgagcaatacgaa
gaacttcgtaaagagtttgaacataaacttgaagtgaaacgcaagaaaatcatcaaaggt
gatgaccttgcaccaggcgtattaaaagtggtgaaagtttaccttgcggtgaaacgtcag
atccagccgggtgataaaatggcgggtcgtcacggtaacaaaggtgttatctcaaaaatt
aacccagttgaagatatgccatacgatgaaaatggtcagccggttgaaatcgtattgaac
ccactgggcgtaccgtctcgtatgaacatcggtcagatccttgaaactcacttaggttta
gcagcgaaaggtattggtgatcaaatcaatgcaatgcttaaacaaaaacaagaagtggaa
aaattacgtggttatatccaaaaagcgtatgatttaggtaatggctcacaaaaagtggat
ttaagcactttcactgatgaagaagtgttacgtttagcagaaaacctacgtaaaggttta
cccgttgcaactccagtgtttgacggtgcggacgaagcggaaataaaagagttattaaaa
cttggtggattaccaacttcaggtcaaattaccctttacgatggtcgcactggtgagaaa
tttgaacgtccagtaaccgtgggttatatgtatatgctcaaattgaaccacttagtcgat
gataaaatgcacgctcgctcaacgggttcttatagccttgttacacaacaaccattgggt
ggtaaagcgcaatttggtggtcagcgtttcggtgagatggaggtatgggcacttgaagca
tatggtgcagcttacaccttacaagaaatgctaaccgtgaaatcggatgatgtgaatggt
cgtacgaagatgtataaaaacatcgtaagtggcaatcaacatatggatccaggtacacca
gaatctttcaacgtaataatgaaagaaattcgctcacttggtttaaatatcgagttagat
gaagagtaa
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