Haemophilus influenzae F3047 (nontypeable): HICON_16790
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Entry
HICON_16790 CDS
T01400
Name
(GenBank) DNA topoisomerase I, omega subunit
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hil03032
]
HICON_16790
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_16790
Enzymes [BR:
hil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HICON_16790
DNA replication proteins [BR:
hil03032
]
Prokaryotic type
DNA Topoisomerases
HICON_16790
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HICON_16790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
GSG-1
DUF2399
Motif
Other DBs
NCBI-ProteinID:
CBY87171
UniProt:
A0AAV2U480
LinkDB
All DBs
Position
complement(1565852..1568458)
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSAGEKAKPISTKGMDAEE
KAKIKAEKERNALVKRMGINPYHDWKANYQILPGKEKVVSELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGNDDRFSRVVFNEITKNAIKQAFEKPEQLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEVAVLTNNQNKQAI
RLDVTDYKGKKFDPKNQKEAQSAVDFLNVSDYVVTDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIENHFGAQYLPEKPNF
YSSKENAQEAHEAIRPSDIRALPESLEGMEKDAVRLYDLIWRQFLACQMPPAQYDSSTLT
VTAGDYTLKAKGRILRFDGWTKVLPQIGKNPEDQELPSVTVSEKLALKEVQPTQHFTKPP
ARFTEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESF
GELMNYDFTANMEDTLDKIASGSVNWKTELNQFFKDFSSQLSKAELDELEGGMRPNNLVE
TDIKCPTCDRKMAIRTASTGVFLGCSGYALPPKERCKTTINLIPEAELLNVLDESSETKA
LMDRKRCTKCGTAMDSYVIDAHRKIHICGNNPNCDGYLIEEGSFKIKGYDGPVVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKNGEVAPPKEEPVHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRPVKIAELVQYRERLPEKLAYLADAPQKDPEENEAIVRFSRKEKK
QYVTSEKEGKATKWIVDFTNGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttagtgattgtggagtcgccagcaaaagcaaaaactattaataagtat
ttaggtagccaatatgtcgtgaaatcgagcgttggacatattcgtgatttgccgacggtt
ggttctagtgcaggtgaaaaagctaaaccaatttcaaccaaaggtatggatgccgaagaa
aaagcaaaaattaaggcagagaaggaacgtaacgccttagttaaacgtatggggattaat
ccttatcacgattggaaagcaaattatcagattttgcctggtaaagaaaaagtggtttcc
gagttaaagtcgcttgctaaaaaagcagatcacatttatctcgcaaccgacttggataga
gaaggggaagcgattgcgtggcatttacgtgaagtgattggtggtaacgatgatcgtttt
agtcgcgtggtgtttaacgaaatcactaaaaatgccattaaacaggcttttgaaaagcct
gaacaattaaatatggatcgtgttaatgctcaacaaactcgtcgttttttagatagagtg
gtgggctttatggtgtcgccattactttggaaaaaagtagctcgcgggctttctgctggt
cgagttcaatcagttgcggttaaattattagtcgaacgcgagcgtgaaattaaagcgttc
cagcctgaagaatattgggaagttgccgtccttacgaataatcaaaataaacaagctata
cgcttggatgttacggattataaaggcaagaaatttgatccaaaaaatcaaaaagaagca
caaagtgcggtagattttctgaatgtttcagattacgttgtcacagatttggaaactaag
ccaacaagttctcgccctcgagcaccatttattacatcaacacttcaacaaacggcaagt
actcgcttgggatttggcgttaagaagacaatgatgttagcccaacgtttatatgaagcg
ggttacattacttatatgcgtacagattcaaccaatttgagtcaagatgcgcttaatatg
gcgcgtagctatattgaaaatcattttggtgcacaatatttaccagaaaaaccaaatttc
tattctagtaaagaaaatgcgcaagaggcacatgaggctattcgtccatcagatattcga
gcattgcctgaatctttagaggggatggaaaaagacgcagtacgcctttatgatttaatt
tggcgtcagttcttagcatgtcaaatgccgcctgcacaatatgatagtagcacgctgacc
gttaccgcaggcgattataccttgaaagcaaagggcagaattttacgttttgatggttgg
acaaaagtattgccacaaataggcaaaaatcctgaagatcaagaattgccttcagttact
gtgtcagaaaaacttgctttaaaagaagtgcaaccaacacaacactttaccaaaccacct
gctcgttttactgaagcggctttagtaaaagaattggaaaaacgtggtattggcagacct
tccacttatgcggcaattatttccaccattcaagaacgtggttatgttcgtactgaaaat
cgtcgtttctatgcagaaaagatgggcgaaattgtgactgatcgcctcaatgagtctttt
ggcgaattaatgaattacgatttcaccgcgaatatggaagatactttagataaaattgcc
tctggttcagtaaattggaaaactgaattgaatcaattctttaaggatttttctagccag
ctttctaaagctgaattagatgaacttgaaggcggtatgcgcccgaataatctcgtggaa
accgatattaaatgcccaacttgtgacagaaaaatggccattcgcacggcaagtacgggg
gtgtttttaggatgctcgggttatgcattgccgccaaaagagcggtgtaaaacgacgatt
aatttaattcctgaagcagaattattgaatgttttagatgagtcttcagaaaccaaagca
ttaatggatcgtaaacgttgtacaaaatgtggtacggcaatggacagctatgtaatcgat
gcccatcgtaaaatccatatttgcggtaataatccaaattgtgatggatatttaattgaa
gaaggctcattcaaaattaaaggttatgatggccctgttgttgagtgtgataaatgcggt
gcggatatgcatctaaaacttggtcgttttggcaagtatatgggatgtacaaattgtgat
aacacgcgcaaaattttgaaaaatggcgaggtcgcaccaccgaaagaagagccagtacat
ttccctgagttaaaatgcgaaaaatctgatgcatattttgtattgcgtgatggtgcgagt
ggtgtatttatgtcagcccataacttccctaaatcacgcgaaacacgcccagttaaaatc
gctgaactagtgcaatatcgcgagcgtttacctgaaaaattagcttatttagccgatgct
ccacaaaaagacccagaagagaatgaagcgattgttcgttttagtcgtaaagagaagaaa
caatatgtgacttctgaaaaagagggaaaagcgactaaatggattgttgatttcaccaat
ggaaaatgggttgaacgaaagaaataa
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