Haemophilus influenzae Rd KW20 (serotype d): HI_0739
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Entry
HI_0739 CDS
T00001
Name
(GenBank) DNA polymerase III, alpha subunit (dnaE)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03030
DNA replication
hin03430
Mismatch repair
hin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HI_0739
03430 Mismatch repair
HI_0739
03440 Homologous recombination
HI_0739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hin03032
]
HI_0739
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_0739
Enzymes [BR:
hin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HI_0739
DNA replication proteins [BR:
hin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HI_0739
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HI_0739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AAC22399
UniProt:
P43743
LinkDB
All DBs
Position
complement(796139..799618)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFIHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVSFYSEMLS
SGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITLLLSKAYQRGYNDLPYIDQDW
LIEHRDGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALSRTGRPNEER
YIQAALKLAERCDLPLVATNDVMFLNTEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYF
RSEEDMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLVFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFETEPQ
LQTAYDSDEEVRALINMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDIINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRLVFKEGAEKNGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVAARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVASRIAMTKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVIVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQFKALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaacctcgcttcatccatcttcgcacacacacagatttttcgatgattgac
agtatcgtcaaagtgaaacctcttgtgaaagcttgtgctgccaatgaaatggttgctatg
ggattaacggattttactaatttttgtggtgtggttagtttttatagcgaaatgctttct
tcgggtatgaagcccattatcggggcagatgtaaaagtaaaaagcccattatgtggcgat
gaatactttgatcttactttgctagctaaaaataatgaaggctatagaaatattacttta
ttgttatcaaaggcttatcaacgcggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgcgacggcgtgattattttatcagggggaacgcaaggcgatgtgggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgccgatcatttttatttagcattaagtcgtacaggtcgcccaaatgaagaacgt
tacattcaagcagcgttgaaattagcagaacgttgtgatttaccattggtcgcaactaat
gatgtgatgtttttgaatacagaggattttgaagcccacgaaattcgcgtagcgattcac
gatggctatactttagacgatcctaaacgtccgaaatgttatacctcacagcaatatttt
cgtagtgaagaagatatgtgtaagctgtttgcagacattccttccgctctcgaaaatacc
ttattaattgcgcaacgttgtagtgtgactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtgcaaaaatccaaagagggcttg
gaagaacgtttagtttttttattccctgatgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgcttgcaagttgagctagatgtaattaaccaaatggggttcccaggttat
ttcttgatcgtaatggaatttattcaatggtctaaggataacgatattccagtagggcca
ggtcgtggttctggtgcgggttcattagtggcttatgcattaaaaatcactgatttagat
ccgttagagtttgatttgctatttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggacggtcgcgatcgcgtgattgagcacgttgcagaa
acctatggtcgtggcgcggtatcacaaattattacctttggtacaatggcggcgaaagcg
gttattcgagatgtagggcgagtgctggggcatccttatggtttcgttgatcgtatttct
aaattgattccgccagatccaggtatgacgcttgccaaagcgtttgagaccgagccgcaa
ttacagactgcctacgatagcgatgaagaagtgcgagcattgattaacatggcgcgcaag
ctggaaggtgtgacacgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgattttgcaccactctattgtgataatgaaggcttacatccagttactcac
tttgataaaaatgatgtggaatatgcagggcttgtgaaatttgacttcctaggcttgcgt
actcttactatcattaaatgggcattggatataattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcctgaatcttttgaattactt
aaacgttccgaaaccaccgccgtgttccagttggaatcacgaggtatgaaagatttgatc
aaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattgttccgtccg
gggccgttacaatcgggtatggtagataactttatcgaccgtaaacacgggagagaagaa
gtatcttaccctgacgcagaatatcaacatgcaagtttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaggtgttggctggctat
acgctgggtggggctgacttattgcgtcgagcaatgggtaaaaagaaaccagaagaaatg
gcaaaacagcgtttagtgtttaaagagggggctgagaaaaacggtattgatggcgagcta
tctatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tctgctgcttatgccttggtgtcttaccaaactctttggcttaaaactcatttccctgca
gaatttatggctgcagtgatgacatcagaaatggataatacggataaaatcgtaggttta
tacgacgaatgtttgcgtatgggcttaaaagtgacgccaccagatattaatatcggaaaa
caccattttagtgtcaatgaacaaggcgaaattgtgtatgggattggcgcgattaaaggc
gtgggggaaggcccgattgaagcacttgtggcggcaagaaatgaaggggggattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgtacttttgaa
agcctaattatgtcgggtgcctttgataaattaggcccacatcgcgccgcactttctaag
aatttggaagatgcacttagagcttccgatcagcatgcgaaagatgaagcaatgggacaa
acggatatgttcggtgtgctgactgaaacccatgaagacgtggaaaatgcctatgctaat
acaccgccttataccgaaaaacaaatccttgatggcgaacgagaaaccttggggctttat
ttaagtagccatcctgttagccgttatttgaaagaactttcccattacacatcgacgcgg
ttgaaagatctcgcaccaaatcgccgtggacaaattagcactgtggcggggctcgttgtg
gcatcgagaattgcgatgacgaaaaaaggcaatcgtctaggtattgcaacattggatgac
cgttcaggtcgcttagatttaacattatttggtgaaagcctagaacaatttggtgagaaa
ttacaaaaagatacagtgattgttgcttcagggcaggtgagctttgatgatttctctggt
ggcttgaaaatgacggtgcgcgagttaatgaccttagatgaggctcgttctcgttatgtc
aaatccttggctattagtctttctgagcatcaaattacaccaagtttcattaaacaattt
aaagcattacttgagccagtgagtggtggaacattgcctattaacgtgtattatcaaagt
ccgaaaggtcgtgcgttgttacgtttaggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttactcggcgaaagtgcggtggaattagagtttgaataa
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