Haemophilus influenzae Rd KW20 (serotype d): HI_0856
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Entry
HI_0856 CDS
T00001
Name
(GenBank) DNA polymerase I (polA)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03030
DNA replication
hin03410
Base excision repair
hin03420
Nucleotide excision repair
hin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HI_0856
03410 Base excision repair
HI_0856
03420 Nucleotide excision repair
HI_0856
03440 Homologous recombination
HI_0856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hin03032
]
HI_0856
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_0856
Enzymes [BR:
hin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HI_0856
DNA replication proteins [BR:
hin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HI_0856
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HI_0856
NER (nucleotide excision repair)
GGR (global genome repair) factors
HI_0856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Thioredoxin_4
HHH_5
HTH_KIF26A_B_1st
Motif
Other DBs
NCBI-ProteinID:
AAC22515
UniProt:
P43741
LinkDB
All DBs
Position
complement(902724..905516)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAV
VFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGT
LALQASSLGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYL
ALMGDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEK
NNADLSYTLATIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ
TTEQPVKMNQYKATSQDQSAVENTPKIQIDRTKYETLLTQADLTRWIEKLNAAKLIAVDT
ETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTLEKSTALAAIKPILENPNIHK
IGQNIKFDESIFARHGIELQGVEFDTMLLSYTLNSTGRHNMDDLAKRYLGHETIAFESLA
GKGKSQLTFNQIPLEQATEYAAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVL
SRMERTGVLIDSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLELP
VLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQMVNSQTGRVHT
SYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIAREGYSIVAADYSQIELRIMAHL
SGDQGLINAFSQGKDIHRSTAAEIFGVSLDEVTSEQRRNAKAINFGLIYGMSAFGLSRQL
GISRADAQKYMDLYFQRYPSVQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNAMRRK
GAERVAINAPMQGTAADIIKRAMIKLDEVIRHDPDIEMIMQVHDELVFEVRSEKVAFFRE
QIKQHMEAAAELVVPLIVEVGVGQNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaattgcaacaaatccgcttgtgctagtggatggttcttcttatttatatcgt
gcatttcatgcctttccttctttaactaatgccgcaggtgagccaacaagcgcgatgtac
ggcgtgttaaatatgttaaaaagcctcatctcacaagtacagcccactcatatagccgtt
gtttttgatgcaaaagggaaaacatttcgtgatgaaatgtttgaacaatataaatctcac
cgaccaccaatgcctgatgatttacgcaaacaaattcagcctttgcacgatatgattcgt
gcattgggcattccgcttttagtggtggaagggattgaggcagatgatgtgatcggcacg
ctcgcactacaagcatcaagtttgggtaaaaaagtactcattagtactggcgataaagat
atggcacagttggtggatgacaatattatgctcatcaacaccatgaataatagcttatta
gatcgcaagggcgtgattgaaaaatacggtattccacctgaactcattattgattatcta
gcactcatgggcgatagtgcagataacattcctggcgttgctggcgtgggcgaaaaaacc
gcacttggtttactacaaggcataggaagcatggctgaaatttatgccaatcttgaaaaa
gtagcggaactgccaattcgtggagcgaaaaaattaggtgaaaaattattggcagaaaaa
aacaatgccgatctttcttatacattagcaaccatcaaaaccgatgttgaacttaacgtg
acaacagatcaattgttgcttggagaaagccaaaaggatcaacttattgaatattttgct
cgctacgaatttaaacgctggcttaatgaagtgatgaatggggcagattctattacccaa
accactgaacagccagtgaaaatgaaccagtataaagcgacctcacaagatcaaagtgcg
gtggaaaatacgcctaaaattcaaatcgatcgtacaaaatatgaaaccttgctcactcaa
gcggatttaacccgctggattgaaaagctcaatgcagcaaaactcattgcagtcgatact
gaaacagacagccttgattatatgtctgcgaatttagtgggtatctcttttgctcttgaa
aatggcgaagctgcttatttaccattgcaattggattatttggatgcaccaaaaacactc
gaaaaatcgaccgcacttgccgctatcaaaccaatcttagaaaatcctaatattcacaaa
attggacaaaacattaaatttgatgaaagtatttttgcccgtcatggcattgaattacaa
ggtgttgaatttgatacgatgttgctttcctatacgctaaatagtacgggtcgtcataat
atggacgatttagccaaacgttatttaggtcatgaaactatcgcatttgaaagccttgca
ggaaaagggaaaagtcagcttacgtttaatcaaattccattagaacaagccacagaatac
gcggcagaagatgctgatgtgacaatgaaattacaacaagcactgtggttgaaactgcaa
gaagaaccaacgcttgttgaattgtataaaacaatggaattaccattgcttcatgtgctt
tctcgtatggaacgtacaggcgttttgattgatagtgatgctctctttatgcaatctaac
gaaattgcctcaagattaaccgcacttgaaaaacaagcttacgcattagcgggtcagcca
ttcaatttagcctccaccaaacaattacaagaaattttgttcgataaacttgagctacct
gttttacaaaaaacgccaaaaggtgcgccatcaacgaatgaagaagtattggaagaatta
tcctatagccacgaattacccaaaattttggttaaacatcgtgggttgagcaaacttaaa
tccacttacacggataaactgcctcaaatggtcaattcacaaacaggccgagtgcatacc
tcttatcatcaagcggtgacggcgacagggcgtttatcatcaagtgatccaaacctacaa
aatattccaattcggaatgaagaaggtcgtcatattcgacaagcatttatcgcgcgtgaa
ggttattctattgtcgccgctgactattctcaaattgagttacgcattatggcgcatctt
tcaggcgatcaaggcttaattaatgcgttctcgcaaggcaaggatattcatcgctccacc
gcagctgaaattttcggtgtatcattagatgaagtcaccagcgagcaacgtcgcaatgct
aaagcgattaatttcggcttaatttatggaatgtccgcctttggactttcacgccaactt
ggtatttcccgtgctgatgcacaaaaatatatggatttatatttccaacgctatcctagc
gtacaacaatttatgactgatattcgtgaaaaagcgaaagcacaaggctatgtggaaacg
ctatttggtcgccgtttatatttaccagatattaattctagcaatgcaatgcgtcgtaaa
ggagcagaacgtgtggcaatcaatgcaccgatgcaaggcacggctgcggatattattaaa
cgagcgatgattaaacttgatgaagtaatccgtcacgatccagatattgaaatgattatg
caagtacatgatgaattagtgtttgaagtgcggtcagaaaaagtcgcgtttttccgtgag
caaattaaacaacacatggaagccgctgctgaattagttgtcccattgattgtggaagta
ggtgttggacaaaattgggatgaagcgcattaa
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