Haemophilus influenzae Rd KW20 (serotype d): HI_0892
Help
Entry
HI_0892 CDS
T00001
Name
(GenBank) ATP-dependent RNA helicase (rhlB)
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HI_0892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hin03019
]
HI_0892
Enzymes [BR:
hin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HI_0892
Messenger RNA biogenesis [BR:
hin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HI_0892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AAC22552
UniProt:
P44922
LinkDB
All DBs
Position
945227..946483
Genome browser
AA seq
418 aa
AA seq
DB search
MIFMQQDYLSQQRFSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGT
GKTMAFLTATFHHLLTHQDPNLKYPHPRALILAPTRELAVQISNDAEFLAKASGLKTALA
YGGDGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRD
IRYLLRKCPAPQARLTMLFSATLSYKVRELAFEDMNEPEYIEIEPEQKTGHRIKEELFYP
SNQDKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSL
LKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSIS
FACEEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPPQGHTRHRSYHAK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttatgcaacaagattatttaagccaacaacgattctccgctcttcctctacac
ccgattgtgcgaggtgctttggcaaaaaaaggctttgatttttgtaccccaattcaggct
ttatccttgcctatcagtttaaatggacgagatgtcgcaggacaagctcaaactggtaca
ggcaagacaatggcttttttaacggctacttttcaccatcttttaactcaccaagatcct
aatcttaaatatcctcacccaagagctttgattttagcacctactcgagaattagcggta
cagattagtaatgacgcagaatttcttgcaaaagcgagtggattaaagaccgcacttgcc
tatggtggcgatggttatgataaacaactacaagcgattgagcgtggcgtcgatattttg
attggtacgacggggcgagtcattgattatgtgaaacaaggcgtaattggtttagatgaa
atccaagttgtcgtgctagatgaagcagatcgaatgtttgatcttgggtttatccgtgat
attcgttatttattgcgtaaatgccccgctccgcaagctcgtttaacgatgttattttca
gcgacgctttcttataaagtgcgtgaattagcatttgaagatatgaatgaacctgaatat
attgaaattgaaccagaacaaaaaacagggcaccgaattaaagaagaacttttttatcca
tctaatcaggataaaatggcacttctcttaaccttaatggaagatgaatggcctgaacgc
tgtattgtatttgcgaatacgaaacatcgttgtgaagaaatttggggctatttggcggct
gatgggcatcgtgtcggtttactgactggcgatgtagcacagaaaaaacgtttatcgtta
ttaaaacaatttactgatggtgatttggatattttagtggcaacagatgtggctgctcgt
ggcttgcatatttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaa
gattatgttcaccgaattgggcgtactggacgagcaggggaaagtggtgtttcgattagt
ttcgcttgtgaagaatatgcgatgaatttaccagcaattgaagaatatattggccattct
atccctgtgagccaatatgaaacagaagccttgcttgaactgccgaaaccgtatcggttg
aaacgtgcggtgccaccgcaaggacatacaagacatcgttcttatcacgcaaaatag
DBGET
integrated database retrieval system
