Haemophilus influenzae Rd KW20 (serotype d): HI_0946
Help
Entry
HI_0946 CDS
T00001
Name
(GenBank) formamidopyrimidine-DNA glycosylase (fpg)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HI_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_0946
Enzymes [BR:
hin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HI_0946
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HI_0946
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HI_0946
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_TiaS
DUF8259
Zn_ribbon_6
DZR
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
AAC22606
UniProt:
P44948
LinkDB
All DBs
Position
complement(1005582..1006397)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELITLKNVKIVDLTRRAKYLI
IHTEKGYIIGHLGMSGSVRIVPQDSAIDKHDHIDIVVNNGKLLRYNDPRRFGAWLWTENL
DDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGVGNIYTNESLFICG
IHPLKLAKNLTRNQCFSLVNTIKDVLRKAIIQGGTTLKDFLQPDGRPGYFAQELLVYGNK
DKPCPKCGGKIESLIIGQRNSFFCPKCQKRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaagtcgaaactgcactacgtggtattagcccttatcttaagaat
tttacgattgagaaagttgtcgtgcgccagcctaaattgcgctgggctgtatcagaggaa
ttgataacgctaaaaaatgtaaaaattgtcgatctcactcgtcgagcaaaatatttgatt
attcacacggaaaaaggctatatcatcgggcatttgggcatgtcaggttcggtgcgaatt
gtgccacaggatagtgcaatagataaacatgatcatattgatattgtagtgaataatggc
aagttattacgctataacgatcctcgccgtttcggtgcatggttgtggacggagaatcta
gatgactttcatcttttcttaaagttaggccctgaaccactttctgatgaatttaatgca
gaatatttattcaaaaaatctcgtcaaaaatcaaccgcacttaaaactttcttgatggat
aacgctgtggtagtgggcgttggaaatatttatacgaatgaaagtttgtttatttgtggc
attcatccccttaaactcgctaaaaatttgactcgcaatcaatgtttctctttagtgaac
acgattaaagatgttttgagaaaagccattattcaaggtggaacaacacttaaagatttt
ttacagcccgatggtcgcccaggttattttgcacaagaattattggtatatggcaataaa
gataaaccttgtccaaagtgcggtggaaaaattgaaagtttaattattggacagcgtaat
agtttcttttgcccgaaatgtcagaaaaggggttag
DBGET
integrated database retrieval system
