Haemophilus influenzae Rd KW20 (serotype d): HI_1188
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Entry
HI_1188 CDS
T00001
Name
(GenBank) DNA helicase II (uvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03420
Nucleotide excision repair
hin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HI_1188
03430 Mismatch repair
HI_1188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_1188
Enzymes [BR:
hin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HI_1188
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HI_1188
MMR (mismatch excision repair)
Other MMR factors
HI_1188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AAC22841
UniProt:
Q02322
LinkDB
All DBs
Position
complement(1253722..1255905)
Genome browser
AA seq
727 aa
AA seq
DB search
MMDISELLDGLNDKQRERVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMA
VTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILD
SEDQLRLIKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPNDIEDFNDRQEREWIKIYQ
IYQDTCDRAGLVDFAELLIRVYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKI
LAGKTGQVMIVGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGKLDDCAVLYRS
NSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPTR
GIGDRTLDILRNLTRERQITLWQAVQVATQENMLAGRASTALLRFQELINSLQLDTAEMP
LFAQTDFVIKHSGLYEMYQQEKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLT
HASLEAGEEQASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRLRGTVTRAMNL
AKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSENNTRLQIAFQAQGIKWLIAHL
AKLEKVR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatttctgaattacttgacggactcaacgataaacaacgcgaacgcgtagct
gctcctcttggtaatcacttagtgctagctggtgcaggctcgggcaaaacgcgtgtattg
acgcaccgtattgcttggttaattgcggtcgaaaatatttctgaaggcagcattatggcg
gtgacgtttaccaataaagccgcagcagaaatgcgtcatcgtattcaatctacccttgcc
aaacacgcacaacatcaattatttggtatgtggattggcaccttccatagcattgctcat
cgtttgttgcgagctcatcatttagatgtgggattgccacaagatttccaaattttagat
tcagaagatcaacttcgtttaattaaacgattattaaaattacataattttgatgaaaaa
gcttttccgcctaaacaggcttgttggtacatcaataacaaaaaagatgaaggcttgcga
ccaaatgatattgaagattttaatgatcgccaagaacgtgaatggattaaaatttatcag
atctatcaagacacttgcgatcgcgcagggttggtcgattttgctgaattattaattcgg
gtctatgaattatttgagaaaaaaccattaattttgcaacgttatcaacaacgttttcag
catattttggtggatgaatttcaagacaccaataaaatccaatataaatggatcaaaatt
cttgctggaaaaacaggccaagtcatgattgtgggcgatgatgatcaatctatatacggt
tggcgtggtgcacaaatagaaaatatccaaaaattcttgaaagatttcaaagccgaaaca
attcgccttgaacaaaactatcgttctaccgccaatatcctaaacagcgcaaatgaatta
attgcaaacaatagtgatcgtcttggtaaaaatttatggacagagggtgagaaaggcgat
cctgtgggcatctattctgcctttaatgaattagatgaagcaaaatttgtcgcttcacaa
attcaggattgggtagaacatggcggaaaacttgatgattgcgctgtactttatcgtagt
aatagccaatcacgggttattgaagaagctttaattcgttgtcaaattccataccgtatt
tatggcggtatgcgtttcttcgaacgtcaagaaattaaagatgcgttagcctatcttcgt
ttgattaataatcgtcaagatgatgcggcttttgagcgtgtaattaatacgccaacccgt
ggcattggcgaccgcactttagatatattgcgtaacttaacacgcgaacgccaaattacc
ttatggcaagcagtacaagtcgcaacacaagaaaatatgttggcagggcgagcctcaaca
gccttattacgtttccaagaattaattaattcactacaacttgataccgcagaaatgccg
cttttcgcacaaactgattttgtgattaaacattcgggcttatatgaaatgtatcaacaa
gaaaaaggcgaaaaaggcgaagtgcgtattgaaaacttggaagaattagttaccgcaacc
cgtgaatttatcaaacctgataatgcggaagaaatgaccgaactcactgcctttttaacg
cacgcttccttagaagctggcgaagaacaagcctcgccgcatcaatcttgtgtagaaatg
atgacgttgcactctgcgaaaggcttagaatttcctcgtgtatttatggtgggcgtagaa
gaaggattattcccaagttttcgttcttttgaagaacccggacgtttagaagaagagcgt
cgtttagcttatgtcggtattactcgcgcgaagaaaaaactgaccatctcttatgcggaa
agccgtcgattatatgccaaagaagaacgccatttgccatcacggtttatcgcagaatta
ccgagagaatgtatccaagaaattcgtttacgagggacagtcactcgtgcgatgaaccta
gcaaaagtcggttcattgtcgaataccagtgcggtcgaaaatgaatggaaaatgggtcaa
aaagttaaacacgaaaaatttggtttcggcacagtgattaatgtggaaggttctgaaaat
aacacacgtttacaaatagcattccaagcgcaaggcattaaatggttgattgcgcatttg
gcaaaattggaaaaagtgcggtag
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