Haemophilus influenzae Rd KW20 (serotype d): HI_1322
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Entry
HI_1322 CDS
T00001
Name
(GenBank) exodeoxyribonuclease V, alpha chain (recD)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Pathway
hin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HI_1322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_1322
Enzymes [BR:
hin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HI_1322
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HI_1322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_16
ResIII
AAA_28
UvrD_C
NTPase_1
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAC22967
UniProt:
P45158
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All DBs
Position
1400144..1402066
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AA seq
640 aa
AA seq
DB search
MLSVLHKLKELRILSQGDYYFAKLIADKQCHTDYAEPVKNLAILLAALCSWRYTQGNTCS
QLDRYLEHNLFGLAYRTTEEDYLAEIHEKIGYLPVEDWQNALCGHMAFTQDPVNQIAPMA
FQFGALYFYRAWQDEYRIVQYIKNTLKKYRTLAFSYDEIHQKLEKYFPEKQEKTDWQKVA
VATAIKSPFSIITGGPGTGKTTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKN
ALGFMQEKMNVSHSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI
DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVTQPYSHEQAAYLLATTG
YKVEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLSEFIQKGKADDSLELFDHYPQELHFN
SLNDEGDAVNQVVKSAVENYRTFLKMLDDLRKQKIDPNAKNEQGISYAEAIQVQFNSVRF
LTALRNNNLGVENLNKEIALALREQKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGL
CLANGKVWFGNREVLTNRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPVLSRELVFT
GVTRAKKELTVFADEKIWKTAIRQTVKRQSGLGKLLEDLN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgtattacacaaacttaaagagctgcgcattctttctcaaggtgattattat
tttgctaagttgatagctgataaacaatgtcatacggattatgcggaaccagtcaaaaat
ttagccatattattagccgcactttgtagttggcgttatacgcagggaaatacttgcagc
caattagatcgctatttagaacataatttatttggcttggcttatcgcactacagaagaa
gattatttagctgaaattcatgaaaagattggttatttacccgttgaagattggcaaaat
gcgttgtgcgggcatatggcatttacgcaagatcccgtcaatcaaattgcaccaatggca
tttcaatttggcgcgttgtatttctatcgcgcttggcaagatgaatatcgcatcgtgcaa
tatataaaaaataccttaaaaaaataccgcactttagccttttcttatgatgaaattcat
caaaaattagagaaatatttccctgaaaaacaggaaaaaacagattggcaaaaagtggca
gtggcgacagcgattaaaagtccattttcgattattacaggcggcccaggaacaggaaaa
accacgacagttacgcgtttattgctcgttctacaagaattatttgattgtaaattacac
atcaaattggttgcgccgactggcaaggctgcatctcgtttggaagagtcgattaaaaat
gcgttaggttttatgcaagaaaaaatgaatgtatcccattcacttttcaatgcgattcca
caaaaagccagcaccttgcatagtttactgggcgtgaatgcctttaatgattacacacga
tataacagccataaccctttgcagttggatgtattagttgttgatgaaacatcaatgatt
gatttaccaatgatggcaaaacttatcaatgcattaaagcccgaaactcgattaatttta
ttaggcgatcaggcgcaattagcctctgttgaggcgggggctgtattgggggaattggct
caatttgttactcaaccttatagtcatgaacaagccgcatacttactagcaacaacaggc
tacaaagtagaaggttccgattgttcaaatccaatacgtgattgcttatgccatctaaca
gaaagtcgccgttttgataaagattcaggcattggcaagttgtccgaattcattcaaaaa
ggcaaagcagacgatagccttgagttatttgaccattatccgcaagaattgcactttaat
tccttaaatgatgaaggcgatgcggtcaatcaagtggtaaaaagtgcggtggaaaattac
cgcactttcttaaaaatgttggacgatttacgtaaacaaaaaattgatcctaacgctaaa
aatgaacaaggcatttcctatgccgaagctattcaagtgcaatttaattctgtgagattt
ttaaccgcacttcgtaataacaatttaggtgtcgaaaatctcaataaagaaattgcgtta
gcgttgcgagagcaaaaattgctttggttccgtaatgaacaagattggtatatcggcaag
ccaattatgattactgaaaacgatcataacgttcgcctttataacggcgatattggacta
tgcttggcaaatggcaaagtatggtttggcaatcgagaagtgctgacaaaccgaattcca
gcgcacgaacccgcttttatgatgacgattcataaatctcaaggttcagaatttaaacat
accgtcatggtgcttccaacagaagtaaatccagtattgtcgcgagaattagttttcacg
ggtgtcactcgtgcaaaaaaagaacttactgtatttgctgatgaaaaaatatggaaaaca
gcaattcgccagaccgtcaaacgccagagcggattgggaaaattattggaagatttaaat
tag
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