Haemophilus influenzae PittEE (nontypeable): CGSHiEE_00890
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Entry
CGSHiEE_00890 CDS
T00543
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hip03009
]
CGSHiEE_00890
Enzymes [BR:
hip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGSHiEE_00890
Ribosome biogenesis [BR:
hip03009
]
Prokaryotic type
rRNA helicases
CGSHiEE_00890
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ABQ97668
LinkDB
All DBs
Position
169060..170379
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AA seq
439 aa
AA seq
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MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREDKKKTEAKKKVKL
RHKDTKNIGKRRKPSNSNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcccaatttgaacaattcgatctttctccagagcttttaaaggcgcttgaa
aaaaaaggttattcccgcccaaccgctattcaaatggaagccattcctgccgcaatggaa
gagcgtgatgtattaggctcggcaccaacgggaacagggaaaaccgctgcttttttatta
cctgcgctacaacatttattggattatccgcgtcgtaaaccaggtccaccgcgtattttg
gtattaacaccaacccgcgaactggcaatgcaagtggctgaacaagcggaagaattagcg
cagttcacccatttaaatattgcgacaattacaggtggcgtggcgtatcaaaatcacggt
gatgtattcaataccaatcaagatttggtggtggcaacgcccggtcgtttattgcaatac
attaaggaagaaaattttgattgccgttccgttgaaatgctgatttttgatgaagccgat
agaatgttacaaatgggatttgggcaagatgcggaaaaaattgcagctgaaacccgttgg
cgaaaacaaactttgttgttttctgcaaccttagaaggggagctattggtcgatttcgcg
gagcgtttattgaatgatcctgtgaaagtagatgcggaaccaagccgtcgagagagaaaa
aaaatcaaccaatggtattaccacgcagacagcaatgaacacaaaatcaaattgctcgcg
cgttttattgaaactgaagaagtgacgcgtggaattgtgtttgttcgccgtcgtgaagat
gcgcgtgaactttccgaaacattgcgtaaacgaggcattcgttccgcatatttagaaggc
gaaatggcacaaactcaacgtaacaatgccattgataaattgaaatcaggtattgtgacg
gtattggttgcaacggatgtggctgcacgtggtattgatattgatgatgtaagccatgta
atgaattttgatttgccctatagtgcggatacttatttacatcgaattggacgtaccgca
cgagctggcaaaaaaggcacggcagtctcttttgtcgaagcgcatgattacaagttactt
ggtaaaatcaaacgttatacagaggaaattttaaaggcgcgcattttagcaggtttagaa
cctcgcactaagccaccaaaagatggtgaagtgaaatcggtcagcaaaaaacaaaaggca
cgcattaaagaaaaacgtgaagataagaaaaaaacagaggcaaagaaaaaagtaaaattg
cgtcataaggatacgaaaaatatcggcaaacgacgcaagccaagtaacagtaatgtttaa
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