Haemophilus influenzae PittEE (nontypeable): CGSHiEE_00930
Help
Entry
CGSHiEE_00930 CDS
T00543
Name
(GenBank) hydroxyethylthiazole kinase
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGSHiEE_00930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hip03019
]
CGSHiEE_00930
03009 Ribosome biogenesis [BR:
hip03009
]
CGSHiEE_00930
Enzymes [BR:
hip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CGSHiEE_00930
Messenger RNA biogenesis [BR:
hip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGSHiEE_00930
Ribosome biogenesis [BR:
hip03009
]
Prokaryotic type
rRNA processing factors
CGSHiEE_00930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ABQ97676
LinkDB
All DBs
Position
complement(176256..179063)
Genome browser
AA seq
935 aa
AA seq
DB search
MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKANIYKGTITRVEPSLEAAFVDY
GAERHGFLPLKEIAREYFPDDYVFQGRPNIRDILTEGQEVIVQVNKEERGNKGAALTTFV
SLAGSYLVFMPNNPRAGGISRRIEGDERTELKEALSSLDVPDGVGLIVRTAGVGKSPEEL
QWDLKVLLHHWEAIKQASQSRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDSPKIFEKA
KEHIKLVRPDFINRVKLYQGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTA
IDINSARSTRGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPIRHQREVEN
RIRDAVRPDRARIQISRISRFGLLEMSRQRLSPSLGESSHHICPRCQGTGKVRDNESLSL
SILRLLEEEALKENTKQVHTIVPVQIASYLLNEKRKAISNIEKRHNVDIIVAPNEAMETP
HFSVFRLRDGEEVNELSYNLAKIHCEKDENTEESLVSRNIETTAVIEQPAVESAAVALSI
SEAAPTPVERKSNEPSLLAKIIAKIKGLFTAKSEENKPKNNRTSRNSNRNQRRSQDRRTS
RRPRSENNEAERTEEQVRNVRERNQRRPRRNLVEESIAESAVNSTPVFEAKEERTEPVTQ
RRQRRDLRKRVRVEDNETVVENNFSTTEKMPEVDVITVQNNDEKPVHQNQRSERQERQRR
TPRHLRAANNQRRRRNQEPKSPMPLFAAVVSPELASGKAWIDYSTVNLPKENHFLSVDEL
LEQEKTKKGFITPAMGIIVEEKSPDVKPALDFITQPANESVQKKVQESLDRLSSYKPQEV
VESIDPAINVDEPETLEKVSKFVRTYEFNGRLGTISSVPHTKAEMTLAKANDEMPEAFPI
RAWQDSRYYFYGKGAAGHHCAISHVYSEPTRAKSE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaatgcaactcaaaaagaagagttgcgtgttgcgcttgtcgat
ggacaacgcctttttgacttggacattgaaagcccaggacacgaacaaaaaaaagcgaat
atctacaaaggaacaattactcgcgttgagccaagcttagaagcggcttttgtagattat
ggtgcagaacgtcacggttttttacctttaaaagaaattgcccgtgaatattttcctgat
gattatgtttttcaaggtcgtccgaatattcgcgatattttgactgaaggacaggaagtt
atcgttcaagttaataaagaagaaagaggaaacaaaggtgcagccttaactacttttgtt
tctcttgccggtagttatttggtgtttatgccgaataatccacgggcaggaggaatttct
cgccgtattgagggcgatgaacgtactgaactaaaagaggcattaagttcattagatgtg
cctgacggtgtaggcttaatcgtccgtactgctggtgtgggaaaatcgccagaagaatta
caatgggatttaaaagtattattacatcattgggaagcgatcaaacaagcttcacaaagt
cgtccagctccatttttaattcatcaagaaagcgatgtgattgtacgcgctattcgcgat
tatttgcgtcgtgatattggtgagatcctgattgatagcccaaaaatttttgagaaagcg
aaagagcatatcaaacttgtgcgtcctgatttcatcaatcgcgtgaaactttatcaaggc
gaagtgccacttttcagtcactatcaaattgaatctcaaattgaatccgcattccaacgt
gaagtacgtttgccttcagggggttcaattgttattgatgttaccgaagcattaaccgcc
attgatattaactccgcacgttctactcgtggtggcgatattgaagaaacggcattaaat
accaaccttgaagcggcagatgaaatcgcgcgtcaattacgtttacgtgacttaggtggt
ttagttgttatcgatttcattgatatgacaccaatccgccatcaacgtgaagtagaaaat
cgtattcgtgatgcggttcgtccagatcgcgcccgtattcaaattagccgaatttctcgt
ttcggcttgttggaaatgtcacgtcagcgtttaagcccatcattgggcgagtcttcgcac
catatttgccctcgttgtcaaggcacaggcaaagtgcgtgataatgaatctctttcttta
tctattttgcgtttactggaagaagaagcgttaaaagaaaacacaaaacaagttcatacc
attgtgccagtacaaattgcctcttatcttcttaacgaaaaacgcaaagcaatcagcaat
attgaaaagcgtcataatgtcgatattattgttgccccaaatgaagcaatggaaacaccg
cactttagtgttttccgtttacgtgatggcgaagaagtaaatgaattaagctataactta
gcgaaaattcactgtgagaaagatgaaaatactgaagaatcactggtttctcgtaatata
gaaacaacagctgttattgaacagcctgcggttgaaagtgcagcagtggcgctttctatt
tcagaagctgcgccaacgccagttgagcgtaaatcaaatgaaccctctttgttagccaaa
attattgcaaagattaaaggtttatttactgctaaatctgaagaaaacaaaccaaaaaat
aaccgcacttcacgcaattctaatcgtaatcaacgccgttcgcaggatcgtcgcacttct
cgtcgtccacgttctgaaaataacgaggcggaaagaactgaagaacaggttcgcaatgtc
cgtgagcgtaatcaacgccgtccgcgccgtaacttagtggaagaaagtatcgctgaaagt
gcggtaaattctacacctgtttttgaggctaaagaagaaagaactgagcctgtaactcaa
cgccgccaacgccgtgatttacgtaaacgcgtgcgcgttgaagataatgaaacagttgtt
gaaaataacttcagcacgactgaaaaaatgccagaagtggatgtaattacggttcaaaat
aatgatgaaaaacccgttcatcagaaccaacgttctgaacgtcaagagcgtcagcgtcgt
actccacgtcatttacgtgcagcgaataatcagcgtcgtcgccgtaatcaagagccaaaa
tcgccaatgccattatttgctgcggtggtttcgcctgaattggcaagtggcaaggcttgg
attgattattcaacggtaaatctgccaaaagaaaatcatttcttatctgtggatgaattg
cttgagcaagagaaaactaaaaaagggtttatcacgccagcaatgggaattatcgttgaa
gaaaaatcccctgatgtaaaacctgcattagattttattactcaaccagctaatgaatcg
gtacagaaaaaagtacaagaatctttagaccgtttaagttcatataaacctcaagaagtt
gttgaatctattgatccagcaattaatgtagatgaacctgaaacgctcgagaaagtatca
aaatttgtccgcacttatgaatttaatggacgtttaggtacaatttcttcagtgccccat
acaaaagcggagatgactttagcgaaagcaaatgatgaaatgccagaggctttcccgatt
agggcttggcaggattctcgttattatttctatggaaaaggcgcggcaggacatcattgt
gcaattagccacgtttattctgaaccaacccgcgcaaaatcagaataa
DBGET
integrated database retrieval system
