Haemophilus influenzae PittEE (nontypeable): CGSHiEE_05000
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Entry
CGSHiEE_05000 CDS
T00543
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGSHiEE_05000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hip03400
]
CGSHiEE_05000
Enzymes [BR:
hip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGSHiEE_05000
DNA repair and recombination proteins [BR:
hip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGSHiEE_05000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
UvrD_C
ResIII
NTPase_1
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABQ98391
LinkDB
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Position
complement(1012602..1014524)
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AA seq
640 aa
AA seq
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MLSVLQKLKEQGILSQGDYYFAKLIADKQCHMDYAEPIKNLAILLAALCSWRYTQGNTCS
QLDRYLENNLFGLAYRTTEEDYLAEIHEKIGYLPVEDWQNALCGHMAFTQDPVNQIAPMA
FQFGALYFYRAWQDEYRIAQYIKNTLKKYRTLAFSYDEIHQKLEKYFPEKQEKTDWQKVA
VATAIKSPFSIITGGPGTGKTTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKN
ALGFMQEKMNLSDSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI
DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVNQPYSHEQAAYLQATTG
YEVKGADCSNPIRDCLCHLTESRRFDKDSGIGKLAEFIQKGKADDGLGLFEHYPQELHFN
ALNDESDAVNQVVKSAVENYRTFLKMLDDLRKQKIDPNAKNEQGISYAEAIQAQFNSVRF
LTALRNSDLGVENLNKEIALALRAEKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGL
CLANGKVWFGNREVLTSRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPVLSRELVFT
GVTRAKKELTVFTDEKIWKTAIRQTVKRQSGLGKLLEDLN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagtactacaaaaacttaaagagcagggcattctttctcaaggtgattattat
tttgctaagttgatagctgataaacaatgtcatatggattatgcagaaccaatcaaaaat
ttagctatattattagccgcactttgtagttggcgttatacgcagggaaatacttgcagc
caattagatcgctatttagaaaataatttatttggcttggcttatcgtacaacggaagaa
gattatttagctgaaattcatgaaaagattggttatttacccgttgaagattggcaaaat
gcgttgtgcgggcatatggcatttacgcaagatcccgtcaatcaaattgcaccaatggca
tttcaatttggcgcgttgtatttctatcgcgcttggcaagatgaatatcgcatcgcacaa
tatataaaaaataccttaaaaaaataccgcactttagccttttcttatgatgaaattcat
caaaaattagagaaatatttccctgaaaaacaggaaaaaacagattggcaaaaagtggca
gtggcgacagcgattaaaagtccattttcgattattacaggcggcccaggaacaggaaaa
accacgacagttactcgtttattgctcgttctacaagaactatttgattgtaaattacac
atcaaattggttgcgccgactggcaaagcagcctctcgtttggaagagtcgattaaaaat
gcgttaggttttatgcaagaaaaaatgaatttatccgattcacttttcaatgcgattcca
caaaaagccagtaccttgcatagtttactgggcgtgaatgcctttaatgattacacgcgc
tataacagccataatcctttgcagttggatgtattagttgttgatgaaacatcaatgatt
gatttgccgatgatggcaaaacttatcaatgcgttaaagcccgaaactcgattaatttta
ttaggcgatcaggcgcaattagcctctgttgaggcgggggctgtattgggggaattggca
caatttgttaatcaaccttatagtcatgaacaagctgcgtatttacaagcgacaacagga
tacgaagtaaaaggtgctgattgttcaaatccaatacgtgattgcttatgccatctaaca
gaaagccgccgttttgataaagattcaggtattggcaagttggctgaattcattcaaaaa
ggcaaagcagacgatggccttgggttatttgaacattatccgcaagaattgcactttaat
gccttaaatgatgaaagcgatgcggttaatcaagtggtgaaaagtgcggtggaaaattac
cgcactttcttaaaaatgttggacgatttacgtaaacaaaaaattgatcctaacgctaaa
aatgaacaaggcatttcctatgccgaagctattcaagcacaatttaattctgtgaggttt
ttaaccgcacttcgtaatagcgatttaggtgttgaaaatctcaataaagaaatcgcgtta
gcgttgcgagcggaaaaattgctttggttccgtaatgaacaagattggtatatcggcaag
ccaattatgattactgaaaacgatcataacgttcgcctttataacggcgatattggcctg
tgcttggcaaatggcaaagtatggtttggcaatcgagaagtgctgacaagccgaattcca
gcgcatgagcccgcttttatgatgacgattcataaatctcaaggttcagaatttaaacat
accgtcatggtgcttccaacagaagtaaatccagtactgtcgcgagaattagttttcacg
ggcgtcactcgtgcgaaaaaagaactcacagtatttaccgatgaaaaaatatggaaaaca
gcgattcgccagaccgtcaaacgccagagcggattgggaaaattattggaagatttaaat
tag
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