Haemophilus influenzae PittEE (nontypeable): CGSHiEE_05005
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Entry
CGSHiEE_05005 CDS
T00543
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGSHiEE_05005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hip03400
]
CGSHiEE_05005
Enzymes [BR:
hip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGSHiEE_05005
DNA repair and recombination proteins [BR:
hip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGSHiEE_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
ResIII
AAA_12
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABQ98392
LinkDB
All DBs
Position
complement(1014524..1018159)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAERIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAIDKLIAFAETQDKSAFKNDEFLTALCHDLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPANVLSLLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALN
ELKAFWLESADEISAIITNELVKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKPATPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQGAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKHLVDGVNALFDFPQSPFIYQNIKFTAVDSRDDHLRFYLNGKAEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAAENQAVFQNEDTRKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATLHESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVSIHKSKGLEYDLVWL
PFLAAPSKDPSKKDINIYYSKERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQ
MAFALPTQFDKKWNALHYVLSQGEIGKEIALSVPKDTETLLQTFKEKMQDNVKICTKPNL
EAFPALSINTKNDDFKAAEFTGNIEQDWRITSFTSIEQAHRRQNYFTESAGKKHAVFDDA
KDYDSQNSIEISTALLNESESSILDLPRGKQVGTALHRHFENCYFSDLANTEEIDKLRQS
LQLDETFTEPLQNWLQQISHTPLSNEIGIALADLANKDCIKEMPFYLAIRAHFDVEAFNR
ALKAHHHLPSEPLQFEQIQGMVRGSIDLVFRHNGKYYLVDYKSNFLGSTLASYNQEALKK
EMLHSHYDWQYLIYTLALHRYLKNVLPRYDYDRNFGGVFYLFLRGMNGEPQSGVFYDRPS
VELITELDGVF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagaatcccactgaatcctatcacgttgcctttaaatcaaattagcttaatc
gaagcgtccgctggtacagggaaaacctacactattggttctttatatctccgactttta
ttaaaggcgggggaaaataacttttctcgtccgttaaatgtggaagaaattctggtggta
acatttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattgataaactcattgcctttgcagaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtcatgatttagatatttttgaggcaattcatcgtttaaaa
ttagctgagcaaaatatggatttggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattctggcattcatttcaatttagaattaataaaagat
caatctgatttgttagttcgttttgctaatgaattttggcgagagcatttttatccgtta
gattttgaatctgcgaattttatcgcgacagaattagtatcaccagcaaatgtgttgtct
ttgttgaaagcggatttaggtaaagatttacaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgcaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaatttcagcgattattacaaatgag
ctggttaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaacccgcaacgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactcagcaaactcact
ctttatcattatcgccaaggtctacaacaaaaacttttagactataaactaaatcatcaa
gaaaaatcctttgatgatttattgcgtttgctgtgtgaagccttgcaaggtgcacaagga
gatgaattagcggaaatgattcgcttccaatatccttttgcgatgattgatgaatttcag
gatacggattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggtgatccgaagcaggcgatttatcgtttccgtggcgca
gatatttttacttatctaaaagcctcagacgaagcccaatctcgctttgaactcactaaa
aattatcgttcagagaagcatttggttgatggtgtaaatgctttattcgattttcctcaa
tcgccatttatttatcaaaatattaaatttactgctgttgattctcgtgatgatcatctg
cgattttatttaaatggcaaagccgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgctatttctattcaacattggctaaaa
agtgcggctgaaaatcaggcagtttttcaaaatgaagatactcgtaaaacattgcaagcg
gcaaatattgccgtattagtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattagggatcgcgtcagtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtgcttaaagcctgtttgaatgtggcagaacgtccaatt
ttgaacgcgattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
caaaatgaagcagattggcaacgttgggcagatagttttgctcaataccaacaaacttgg
caacgccaaggaatattggcaatgttacatcaaattttattggagcaaggcatttcagaa
cgcttattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgctacacgaaagtgaagcggcattgctcagttggtttgaa
aaacaaattcaaggcgaaggtcgtcaagaggctcaaattcgtttagaaagcgaacgccaa
ttggtgaaaatcgtgagtatccataaatccaaaggcttagaatatgatttagtttggcta
ccatttttagctgcgccgagcaaagatccaagtaaaaaagacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatagaaaatcgcaatttaaacgctctttgtgaa
gaaacttttgcggaagagttacgtttactttatgtggctttaacgcgtgccaaatatcaa
atggcattcgctttgcctacgcaatttgataaaaaatggaatgccttgcattatgtacta
agccaaggtgaaataggcaaggaaatagcgttatcagtgcctaaagataccgaaacattg
ttgcaaacctttaaagaaaaaatgcaagataatgtgaaaatctgtactaaaccaaatcta
gaggcttttccggctttatcaatcaatacaaaaaatgatgattttaaagccgcagaattt
acgggcaatattgagcaagattggagaataaccagttttacttcaattgaacaagcacat
cgccgccaaaattatttcactgaaagtgcgggtaaaaaacacgctgtttttgatgatgca
aaagattacgatagccaaaattcgattgaaatttccaccgcacttttaaacgaaagcgaa
tcaagcattttagatttaccacgaggtaaacaagtcgggacggcattgcatcgccatttt
gaaaattgctatttttctgatttagcaaatacagaagaaattgacaaattacgacaatcc
ttacagttagatgaaacctttacagaaccgctacaaaattggctacaacagatttcacat
acgccactttctaatgaaataggaatagcattagctgatttggcaaataaagattgcatt
aaagaaatgccattttatctggcaattagggcacattttgatgttgaagcgtttaatcgt
gcgttgaaagcccatcatcatttaccaagcgagccacttcaatttgagcaaattcagggc
atggtgagaggttcgattgacttagttttccgtcataatggaaagtattatcttgttgat
tataaatctaatttcttaggttcaacccttgcctcttacaatcaagaagcattaaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattacatcgt
tatttgaaaaacgttcttcctcgctatgattatgatcgcaatttcggtggggtattttat
cttttcttacgtggaatgaatggtgagccacaatctggcgtattttatgatcgtccaagc
gttgaattaatcacagaattagatggggtgttttaa
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