Haemophilus influenzae PittEE (nontypeable): CGSHiEE_08050
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Entry
CGSHiEE_08050 CDS
T00543
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGSHiEE_08050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hip03021
]
CGSHiEE_08050
03400 DNA repair and recombination proteins [BR:
hip03400
]
CGSHiEE_08050
Enzymes [BR:
hip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGSHiEE_08050
Transcription machinery [BR:
hip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGSHiEE_08050
DNA repair and recombination proteins [BR:
hip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGSHiEE_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
ABQ98923
UniProt:
A5UDS2
LinkDB
All DBs
Position
complement(1596913..1597899)
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AA seq
328 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILILNKSGIGPVVAADITHDGN
VEIVNPDHVICHLTDENASISMRIRVQRGRGYVPASSRTHTQEERPIGRLLVDACYSPVE
RIAYNVEAARVEQRTDLDKLVIELETNGALEPEEAIRRAATILAEQLDAFVDLRDVRQPE
IKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIAED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgaacaaattagt
tcaacacatgctaaagtgatcttagaaccgttagagcgtggttttggtcatactctaggt
aatgcattgcgtcgtatccttctgtcttcaatgccaggttgtgctgtaactgaagtagaa
attgatggcgtattgcatgaatatagtagtaaggaaggtgttcaagaagatattcttgaa
gtacttttgaaccttaaaggtctagcggttaaagtacagaataaagatgacgttattctg
atattaaataaatctggaattggccctgttgttgcagcggacattacccatgatggtaat
gttgaaattgtaaatccagatcatgtgatttgtcatttaactgatgaaaacgcttcaatt
agtatgcgtatacgtgttcagcgtggtagaggatatgttcctgcttcatctcgtacacat
acgcaagaagaacgtccaattggtcgtttgcttgttgatgcttgttatagtccggttgaa
cgaattgcgtataatgtagaggcagctcgtgttgagcagcgtacagatttggataagctc
gttattgagttagaaactaatggtgcacttgagccagaagaagcaattcgtcgtgcagca
acaatcttggcggagcaacttgatgcattcgttgatttacgtgatgttcgtcagcctgaa
attaaggaagaaaaaccggaatttgatccgattttattacgtcctgtagatgatttagag
ctgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgattta
gtgcaacgtactgaagtagaattattaaaaacccctaatcttggtaagaaatctcttact
gaaattaaggatgttcttgcttctcgtggcttgtcacttggtatgcgccttgaaaattgg
ccgccagcaagtattgctgaagactag
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