Haemophilus influenzae PittGG (nontypeable): CGSHiGG_03775
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Entry
CGSHiGG_03775 CDS
T00544
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hiq
Haemophilus influenzae PittGG (nontypeable)
Pathway
hiq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hiq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGSHiGG_03775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hiq03019
]
CGSHiGG_03775
03016 Transfer RNA biogenesis [BR:
hiq03016
]
CGSHiGG_03775
Enzymes [BR:
hiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CGSHiGG_03775
Messenger RNA biogenesis [BR:
hiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGSHiGG_03775
Transfer RNA biogenesis [BR:
hiq03016
]
Prokaryotic type
tRNA degradation factors
CGSHiGG_03775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH_SLS1_2
S1_2
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABQ99739
UniProt:
A5UG34
LinkDB
All DBs
Position
714826..716955
Genome browser
AA seq
709 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALTLSGVPFNGPIGAVRVGFIDNQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVIEAIKEFAKEAGKPRWDWVAPQPNTD
LINKVKAIAEARLGDAYRITEKQLRYEQIDAIKADVIAQITAEDEEINEGKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGERQDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAI
PAPRADISDYAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAAVD
SNAAKNVMGRIEEIVAEVEAGAIYKGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVNVKVVEIDRQGRIRLTMKDLAPKQETEINQEDSVEEQE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgttaaacaatttaaatacggtcagcataccgttactctagaaactggc
gcgattgcacgtcaagcaacggctgcggttatggcaagcatggacgataccacggtattc
gtgactgttgttgctaaaaaagatgtgaaagaaggtcaagacttcttcccattaaccgta
aactaccaagagcgtacttatgcagcgggtaaaatcccaggtggtttcttcaaacgtgaa
ggtcgtccatctgaaggcgaaactttaattgcacgtttaatcgaccgtccaattcgtcca
ttattcccagaaggtttcttcaatgaaatccaagttgtggcaacggtggtttctgtaaac
ccacaaatcagccctgacttagtagcaatgatcggtgcttctgcagcattaaccttatct
ggcgtgcctttcaatggccctattggtgcggtgcgtgttggttttatcgacaaccaattc
gtattaaacccaactatggcagaacaaaaacaaagccgtttggacttagtggttgcaggt
actgacaaagccgtattaatggttgaatctgaagctgatattttaactgaagaacaaatg
ttagcggcagtcgtattcggtcatcaacaacaacaagttgtgattgaagcaatcaaagaa
tttgcaaaagaagcgggcaaaccacgttgggattgggttgcaccacaaccaaacacagat
ttaatcaacaaagtaaaagcgattgctgaagcacgtttaggcgatgcataccgcattact
gaaaaacaattacgttacgaacaaatcgatgcgattaaagcggatgtgattgcacaaatc
acagctgaagatgaagaaatcaacgaaggtaaaatcgtggatattttcaccgcacttgaa
agccaaatcgtgcgtggtcgtatcattgcaggcgaaccacgtattgatggtcgtaccgtt
gatactgttcgtgcattagatatttgcactggtgtattaccacgtactcacggttctgca
attttcactcgtggtgaaacacaagcattagctgttgcaaccttaggtaccgaacgtgat
gcacaaatcattgatgaattaacaggtgaacgtcaagatcacttcttattccattataat
ttccctccatattctgtaggtgaaaccggtatgattggctcaccaaaacgtcgtgaaatt
ggtcatggtcgtttagcaaaacgtggtgtagcggctgttatgccaagccttgcagaattc
ccgtatgttgtgcgtgttgtctctgaaatcactgaatctaacggttcttcttctatggca
tctgtatgtggtgcgtctttagcattaatggatgcaggtgttccaatcaaagctgctgtt
gcaggtatcgcaatgggcttagtaaaagaagaagagaaattcgtggtgctttcagatatc
ttaggtgatgaagaccacttaggtgatatggactttaaagtagcgggtacacgtgaaggt
gtaaccgcccttcaaatggacatcaaaattgaaggtatcacccctgaaattatgcaaatt
gcattaaaccaagcgaaaagtgcacgtatgcacattcttggtgtcatggaacaagcaatc
cctgctccacgcgctgatatttctgactatgcaccgcgcatctatacaatgaaaatcgat
cctaagaaaatcaaagatgtgattggtaaaggtggtgcaacaatccgttcactaactgaa
gaaactggcacttctattgatattgatgacgatggtacagtgaaaattgccgcagtagac
agcaatgcagcgaaaaacgtaatgggacgtattgaggaaatcgttgcagaagttgaagct
ggcgcaatttacaaaggtaaagtcactcgtcttgctgattttggtgcattcgtcgcaatc
gttggaaataaagaaggtttagttcatatttctcaaattgctgaagagcgcgtagaaaaa
gttagcgattaccttcaagtgggtcaagaagtaaacgtaaaagttgttgaaatcgatcgt
caaggtcgtattcgtttaacaatgaaagacttggctccaaaacaagaaactgaaattaac
caagaagattctgtagaagaacaggaataa
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