Haemophilus influenzae PittGG (nontypeable): CGSHiGG_04290
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Entry
CGSHiGG_04290 CDS
T00544
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hiq
Haemophilus influenzae PittGG (nontypeable)
Pathway
hiq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hiq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGSHiGG_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hiq03021
]
CGSHiGG_04290
03019 Messenger RNA biogenesis [BR:
hiq03019
]
CGSHiGG_04290
Transcription machinery [BR:
hiq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CGSHiGG_04290
Messenger RNA biogenesis [BR:
hiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGSHiGG_04290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
ABQ99818
UniProt:
A5UGB3
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All DBs
Position
807824..809086
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AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKIDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAID
FQRSGTRKEDLLTTADELQKMWILRKILNPMDEVDAMEFLIDKLMMAKTNEEFFEVMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaacttaaaaatacgcctgtttctgatcttgtgaaactcggcgaggag
caaatgggcttagaaaatttagcgcgtttgcgtaaacaagatattgtctttgcaatctta
aaacagcacgccaaaagtggcgaagatattttcggtggtggcgtgttagaaattttacca
gatggttttggtttccttcgttctgccgatagttcctaccttgcaggccctgatgatatc
tatgtttccccaagtcaaattcgtcgttttaatcttcaaactggggataaaatcgaaggc
aaaattcgtccaccaaaagaaggcgaacgttattttgcacttttaaaaattgatcaagtt
aatgatgacaaaccagaagtttctcgtagcaaaatcttatttgaaaacttaacgccatta
catgctaactctcgtttaagaatggagcgaggcaatggctcaacagaagatttaactgcc
cgtattttggatttagcctcgccaattggtaaaggccaacgtggtttgatcgtagctccg
ccaaaagcgggtaaaacaatgttgttgcaaaatattgcacaaagtatcacgcataattat
cctgatgtggaacttatcgtattactgattgatgaacgcccagaagaagtgacagaaatg
caacgttcagtaaaaggcgaagtcattgcttctacttttgatgagccagcaactcgtcac
gttcaagtggcagaaatggtaatcgaaaaagcgaaacgttcagtagagcataaaaaagat
gtggtgattttacttgactctattacccgtttagcacgtgcttacaatacggtaacccca
gcttcaggtaaaattttatctggtggtgtggatgctaacgcattgcaccgtccaaaacgt
ttcttcggtgctgcacgtaacgtggaagaaggcggtagtttaacgattattgccactgcg
ctagtagatacaggttcgaaaatggatgaagtgattttcgaagaatttaaaggtacaggt
aatatggaattacacctttctcgtaaaattgcagaaagacgcgtattcccagccattgac
tttcaacgctctggtactcgtaaagaagacttactcacaacagctgatgaattacaaaaa
atgtggattcttcgtaagattcttaatccaatggatgaagtggatgcaatggaattcttg
attgataagctgatgatggcgaaaaccaacgaagagttttttgaagtgatgaaacgttcg
taa
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