Haemophilus influenzae PittGG (nontypeable): CGSHiGG_07185
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Entry
CGSHiGG_07185 CDS
T00544
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hiq
Haemophilus influenzae PittGG (nontypeable)
Pathway
hiq03030
DNA replication
hiq03430
Mismatch repair
hiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGSHiGG_07185
03430 Mismatch repair
CGSHiGG_07185
03440 Homologous recombination
CGSHiGG_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hiq03032
]
CGSHiGG_07185
03400 DNA repair and recombination proteins [BR:
hiq03400
]
CGSHiGG_07185
Enzymes [BR:
hiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGSHiGG_07185
DNA replication proteins [BR:
hiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGSHiGG_07185
DNA repair and recombination proteins [BR:
hiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGSHiGG_07185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
MJ0607
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABR00300
UniProt:
A5UHP4
LinkDB
All DBs
Position
complement(1328210..1331689)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSQPRFVHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCGVVSFYSEMLS
SGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITLLLSKAYQRGYNDLPYIDQDW
LIEHRDGVIILSGGTQGDVGKKLLKENVAEIESAVAFYQEFFADHFYLALSRTGRPNEER
YIQAALKLAERCDLPLVATNDVMFLNAEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYF
RSEEDMCKLFADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLAFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAE
TYGRGAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFETEPQ
LQTAYDSDEEVRALINMARKLEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTH
FDKNDVEYAGLVKFDFLGLRTLTIIKWALDIINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
VSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQRLVFKEGAEKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTSEMDNTDKIVGLYDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKG
VGEGPIEALVAARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAIGQTDMFGVLTETHEDVENAYANTPPYTEKQILDGERETLGLY
LSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVVASRIAMTKKGNRLGIATLDD
RSGRLDLTLFGESLEQFGEKLQKDTVVVASGQVSFDDFSGGLKMTVRELMTLDEARSRYV
KSLAISLSEHQITPSFIKQFKALLEPVSGGTLPINVYYQSPKGRVLLRLGVQWSIIPTDE
ILTELVNLLGESAVELEFE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaacctcgcttcgtccatcttcgcacacacacagatttttcgatgattgac
agtatcgtcaaagtgaaacctcttgtgaaagcttgtgctgccaatgaaatggttgctatg
ggattaacggattttactaatttttgtggtgtggttagtttttatagcgaaatgctttct
tcgggtatgaagcccattatcggggcagatgtaaaagtaaaaagcccattatgtggcgat
gaatactttgatcttactttgctagctaaaaataatgaaggctatagaaatattacttta
ttgttatcaaaggcttatcaacgcggttataacgatttaccttatattgatcaagattgg
ttaattgaacatcgcgacggcgtgattattttatcagggggaacgcaaggcgatgtgggt
aaaaaattgttgaaagaaaacgtagccgaaattgaaagtgcggtcgctttttaccaagaa
ttttttgccgatcatttttatttagcattaagtcgtacaggtcgcccaaatgaagaacgt
tacattcaagcagcgttgaaattagcagaacgttgtgatttaccattggtcgcaactaat
gatgtgatgtttttgaatgcagaggattttgaagcccacgaaattcgcgtagcgattcac
gatggctatactttagacgatcctaaacgtccgaaatgttatacctcacagcaatatttt
cgtagtgaagaagatatgtgtaagctgtttgcagacattccttccgctctcgaaaatacc
ttattaattgcacaacgttgtagtgtgactttgcgccttggtcaatatttcttacctcaa
tttccaactggcgatttaagtacagaagatttcttagtacaaaaatccaaagagggcttg
gaagaacgtttagcttttttattccctgatgaaaaagtgcggttagaaaaacgaccaaaa
tatgatgaacgcttgcaagttgagctagatgtaattaaccaaatggggttcccaggttat
ttcttgatcgtaatggaatttattcaatggtctaaggataacgatattccagtagggcca
ggtcgtggttctggtgcgggttcattagtggcttatgcattaaaaatcactgatttagat
ccgttagagtttgatttgctatttgaacgtttcttaaatccagaacgtgtgtctatgccc
gatttcgacgtggatttctgtatggacggtcgcgatcgcgtgattgaacacgttgcagaa
acctatggtcgtggcgcggtatcacaaattattacctttggcacaatggcggcgaaagcg
gttattcgagatgtagggcgagtgctggggcatccttatggtttcgttgatcgtatttct
aaattgattccgccagatccaggtatgacgcttgccaaagcgtttgagaccgagccgcaa
ttacagactgcctacgatagcgatgaagaagtgcgagcattgattaacatggcgcgcaag
ctggaaggtgtgacacgtaatgcaggtaaacatgcaggtggcgtggtcatttcgccaacc
ttaattactgatttcgcaccactctattgtgataatgaaggcttacatccagttactcac
tttgataaaaatgatgtggaatatgcagggcttgtgaaatttgacttcctaggcttgcgt
actctcactatcattaaatgggcattggatataattaatgttcgtatggtgcgtgaaggc
aagcctcgagtagatattgccgccattccacttgatgatcccgaatcttttgaattactt
aaacgttccgaaaccaccgcagtgttccagttggaatcacgaggtatgaaagatttgatc
aaacgcctgcaacctgactgttttgaagatattatcgcattggtagcattgttccgtcca
ggtccgttacaatcgggtatggtagataactttatcgaccgtaaacacgggagagaagaa
gtatcttaccctgacgcagaatatcaacatgcaagtttgaaacctattcttgagccgact
tacggcattattttgtatcaagaacaagtgatgcaaattgcgcaggtgttggctggctat
acgctgggtggggctgacttattgcgtcgagcaatgggtaaaaagaaaccagaagaaatg
gcaaaacagcgtttagtgtttaaagagggggctgagaaaaacggtgttgatggcgagcta
tctatgaagattttcgacttggtggaaaaatttgctggctatggttttaataaatctcac
tccgctgcttatgccttggtgtcttaccaaactctttggcttaaaactcatttccctgca
gaatttatggctgcagtgatgacatctgaaatggataatacggataaaatcgtaggtttg
tacgacgaatgtttgcgtatgggcttaaaagtgacgccaccagatattaatatcggaaaa
caccattttagtgtcaatgaacaaggcgaaattgtgtatgggattggcgcgattaaaggc
gtgggggaaggcccgattgaagcacttgtggcggcaagaaatgaaggggggattttcaaa
gatttattcgatttatgcgctcgtgtagatttgaaaaaaattaaccgccgtacttttgaa
agcctaattatgtcgggtgcctttgataaattaggcccacatcgcgccgcactttctaag
aatttggaagacgcgcttagagcttccgatcagcatgcgaaagatgaagcaataggacaa
acggatatgttcggtgtgctgactgaaacccatgaagacgtggaaaatgcctatgctaat
acaccaccttacactgaaaaacaaatccttgatggcgaacgagaaaccttggggctttat
ttaagtagccatcctgttagccgttatttgaaagaactttcccattacacatcgacgcgg
ttgaaagatctcgcaccaaatcgccgtggacaaattagcactgtggcggggctcgttgtg
gcatcgagaattgcgatgacgaaaaaaggcaatcgtctaggtattgcaacattggatgac
cgttcaggtcgcttagatttaacattatttggtgaaagcctagaacaatttggtgagaaa
ttacaaaaagataccgttgttgttgcttctgggcaagtgagctttgatgatttctctggt
ggcttaaaaatgacggtgcgcgagttaatgaccttagatgaggctcgttctcgttatgtc
aaatccttagctattagtctttctgagcatcaaattacaccaagtttcattaaacaattt
aaagcattacttgagccagtgagtggtggaacattgcctattaacgtgtattatcaaagt
ccgaaaggtcgtgtgttgttacgtttaggcgtgcaatggtcgatcattccaacagatgaa
attctgacggaattggtgaatttactcggcgaaagtgcggtggaattagagtttgaataa
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