Haemophilus influenzae PittGG (nontypeable): CGSHiGG_08275
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Entry
CGSHiGG_08275 CDS
T00544
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hiq
Haemophilus influenzae PittGG (nontypeable)
Pathway
hiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGSHiGG_08275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hiq03400
]
CGSHiGG_08275
Enzymes [BR:
hiq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CGSHiGG_08275
DNA repair and recombination proteins [BR:
hiq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGSHiGG_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABR00489
UniProt:
A5UI83
LinkDB
All DBs
Position
1530535..1533915
Genome browser
AA seq
1126 aa
AA seq
DB search
MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIELAKETGISANL
KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIPIFLEKENFSPLRNYLSSSPH
SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITDQIQKQQPNLNDTLFAQIQG
NTKWQGELWRALVVDVKSDVGDATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPT
AYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRFDYLRSRKRYQFNKQDENQPLFSEDQ
LSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYTLVRDEEHIPTYPVNAYQEIESN
SLLGQLQSQILHLENKPLNITKNDRTLTLHSCHSAMREVEVLHDYLLDLFNQDPSLTPKD
VVVMVADINQYTPYIQAVFGQKNGDAPQIPFSLSDNKLSESDVLVSSYLTLLRLKESNFS
AEDVLALLDIPAMRERFNISLADLPLVREWVTDSGIRFGLQKNQDGINFNSWQAGLERMI
LGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSHFFTALSVLHETLQQAHSIEKWQEILT
ALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTIHFNEELQAEVIADVITMKLEDAPNSL
KFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPNSFDLMQYHYQKGDRVRRDDD
RYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQLLDYINQGQKENVLTVIEHPMT
AFSPDNFKYNEKFTRSFATKWLPIAQFDTAASNSEFAVTMTETLEKIEEIEVDSLVSFVE
NPVKFFFEKQLGVYFRDKDERIADSENFTLSGLDNYSLNNDLIYLDEQNFADYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKKKIADLGEAKHASVDFNLSVDWQNENQKIRLFGYMD
ALFGDDSQVIHWHFAKYKDRYCIRPWIYYLIQCVTQENVVQPKLITQDKVLELPPIEREV
ALAQLQIYVKDYLQSQIEIQLVPTIRNINDFIVDDESAVDFDNVFEKLQELTESNGFGSK
ADPYWSRVLAQTSRFKQPENIAKLLKQTKAWFGLLFAQKKTRKAQS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattgtttattattccaatcagcttgaaaaacaaaaagaaattctttcttcatta
ttcaaatctttaccgcctgaagatccttttcaacaagatattatcttggtacaaagccct
aatatggcgcaatggctgcaaattgaattagcgaaagaaacaggtatttcagcaaaccta
aaatttcctatgccagccagttttatttggcaactttatgcacaaaatttacctgcaacg
gcattagagaacccttttgataaagattcaatgatgtggcgtttaatgcgcttaatccca
atttttcttgagaaagaaaatttttcgcctctacgcaattatttatcatcttcgccacat
tctgaacaatataaactttatcaactcagcagtaaaatagccgacttatttgaccaatat
ttagtttatcgacctgaatggatttttgcttgggaaaaaggcgaagatgaacaaatcact
gatcaaatacaaaaacagcaacctaacttaaacgatactttgtttgcgcaaattcaaggc
aatacaaaatggcaaggtgagttatggcgtgcgttggtcgttgatgttaaatcagatgtg
ggtgatgccacccatcgagcagctttgcataatcaattcttagccttgcttgccgataaa
aaagcaccgaaaaaattaccttcacgcatatttatttttggtattcctgcgcttccaact
gcttatcttaatattttgcaagcgatatcctctgaagtggatattcatttattttttaat
aatccttgccaagaatattggggagatattagcgatttacgctttgattatttgcgttct
cgcaaacgttatcaattcaataaacaagatgaaaatcaaccgctcttttccgaggatcaa
ctttctcaactagaaaacgctcagtttgacgtcacttatcaaaaagaaaaccttcaacta
ggcaatccattactggcggcttggggaaaaatgggacgagattttctctatacattggtg
agagatgaagaacatattccaacttatcccgtcaatgcctatcaagaaattgagtcaaac
agtttactcggacaattacagtctcaaattctgcatttagaaaataaaccgttaaatatc
acaaaaaatgaccgcactttaaccctacattcttgccacagtgctatgcgagaagtggaa
gtattgcacgattatttactggatttattcaatcaagatcctagccttacgccaaaagat
gtggttgttatggtggcagatattaaccaatacacaccctatattcaggcagttttcggg
caaaaaaatggggatgcaccacaaattccattttcactttcggataataaactttcagaa
agcgatgtgttggtatcaagttacttaactttattacgcttaaaagaaagcaattttagt
gcagaggatgttttagcgttgttggatattcctgctatgcgagaacgatttaatatttcc
cttgctgatttaccattagtgcgagaatgggtaacggattcagggattcgtttcggtttg
caaaaaaatcaagatggcatcaatttcaattcttggcaggctggattagaacgaatgatt
ttaggctatgcgatgcgtgaagaacagggcatttggcaagatagtctgggcttaaacagc
agttatggcttaaagggcgagcttgctggaaatttatctcattttttcaccgcactttcc
gtgctgcatgaaacgctgcaacaagcacattccatcgaaaaatggcaagaaattttaacc
gcacttttatcagatttcttcgtgcgaaatgaagacacaagcgacatgattttctatatt
caagagaaaattaatgaattagctgagcatctaaaaacgatccattttaatgaagaatta
caagcagaagtgatcgccgatgtcatcacaatgaaattggaagatgcgccaaatagcctc
aaattccttgcaggaaaagtaaatttctgcaccttattaccaatgcgttcagtgccattc
aaagtggtttgtttacttggaatgaatgatgcggattacccaagaacacaaacaccaaac
agttttgatttaatgcaatatcattatcaaaaaggcgatcgtgttcgtcgtgatgatgat
cgctatttgttcttagaagccttattggccgcacgtgattattgctatatcagctatgtt
gggcgttccattacagataatcaaccgaaagaaccatccgtattggtaagccaactgttg
gattatattaatcaagggcaaaaggaaaatgtccttactgtcattgaacatccaatgacc
gcatttagcccagataatttcaaatataacgaaaaatttacccgctcttttgcgacaaaa
tggttgccaatagcacaatttgacacggctgctagcaattcagaatttgctgtcacgatg
accgaaaccctagaaaaaatagaagaaattgaagtggattctttagtcagctttgtggaa
aatccagtgaaatttttctttgaaaaacaacttggtgtttatttccgcgataaagatgaa
cgtattgctgacagtgaaaacttcactttaagtgggttagataattattctctcaataat
gacttaatttaccttgatgaacaaaattttgctgattattttagacaagcagaagtaaaa
ggcgtgttaccgcgcgcagagtttggaaaggtttatgctgaaaatattcgcgacaatgtt
ttagaatttaaaaagaaaatagcagatcttggcgaagccaaacatgcttctgtcgatttt
aatctctccgtagattggcaaaacgaaaatcaaaaaatacgtttatttggttatatggac
gctttatttggcgatgattcacaagtcattcactggcattttgctaaatataaagatcgt
tattgtattcgtccttggatttattatttaattcaatgtgttacacaagaaaatgttgtg
caacccaagttaattacgcaagataaggttctcgaattaccgcctattgagcgtgaagtt
gcgcttgctcaattacaaatttacgtaaaagattatttacaaagtcaaattgaaatccaa
ttggtgccaaccataagaaatattaatgattttattgtagacgatgaaagtgcggtagat
tttgacaacgtttttgaaaaacttcaggaattaactgaaagtaatggtttcggttcaaaa
gccgatccatattggtcacgagtattagcgcagacctcaagatttaaacaacctgaaaat
attgcaaaattattaaaacaaacaaaagcttggtttggcttattattcgcacaaaagaag
acaagaaaggcacaaagctaa
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