Heterobasidion irregulare: HETIRDRAFT_118397
Help
Entry
HETIRDRAFT_118397 CDS
T03455
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hir
Heterobasidion irregulare
Pathway
hir00040
Pentose and glucuronate interconversions
hir01100
Metabolic pathways
Module
hir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HETIRDRAFT_118397
Enzymes [BR:
hir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
HETIRDRAFT_118397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
20666585
NCBI-ProteinID:
XP_009550976
JGI:
Hetan2_118397
UniProt:
W4JVG7
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MFKAAFVIFAAAVPCILGTKQGTACTGTISSLDDVDDAVECTTVNINSFTVPAGETFNLD
LADGTTVNMEGDVSFGNKTWAGPLFQVSGDSVTFNGNGHTFNGNGPFYWDGLGGNGGVTK
PAPMMKIKISGTFTNVKVLNSPARVYSVSNPGPLVMSKLNIDDSLGDLPNSASNRLAAGH
NTDGFDVSTTDLIIESSTIHNQDDCLAINKGSNIVFTGNTCIGGHGISIGSISSDAVVSG
IVISGNTVTNNDQALRIKTKASATSASVSNVTYSGNTGTGLRQFGILIDQSYPDTLGTPG
TGVKISDINFSGSTTSLTVNSGADRVAVNCGAGACTGTWDWASLKVSGGSAGPIVNFDGI
TNFSQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagctgcgtttgtgatttttgccgctgccgtcccctgtattcttggcaccaag
caggggacggcttgtactgggaccatatcttctctggacgacgttgatgacgctgttgaa
tgtaccacggtcaacattaattcgttcactgtgcctgctggggaaactttcaatctcgac
ctcgctgacgggacgactgtgaacatggagggggatgtcagttttggcaacaagacgtgg
gctggtccgctgttccaagtcagtggagactcggttacatttaatgggaatggccacacc
ttcaatgggaatggaccgttctattgggatggccttggcggcaatggaggcgtaacgaaa
ccagcccccatgatgaaaatcaagatctccggtactttcacgaatgtgaaggtactcaat
tcacctgcccgtgtctatagcgtgtccaatcctgggccgttggttatgtcaaaactaaat
atcgacgattcgctcggtgacttgccgaattcagctagcaacagactcgctgctggccac
aacaccgacggttttgacgtcagcaccactgacctgatcatagaaagcagcacgattcac
aatcaggatgactgccttgctatcaacaagggctcaaacatcgtcttcactggcaacaca
tgcatcggtggacatggcatctctatcggatcgatctccagcgacgccgtcgtttctggt
atcgtcatatccggaaacaccgtcaccaacaacgaccaagctctccgcatcaaaacgaag
gcatccgcaacaagtgcctctgtctcgaacgtcacgtacagcgggaacacaggcactggc
ttgcgccaatttggaatcctcattgaccagagctacccggatacccttggaactcctggg
acaggtgttaagatctcagacatcaatttctccggtagcacgacgtccctcactgtaaat
tccggcgctgatcgggtggctgtgaactgtggggctggcgcatgtaccggaacatgggac
tgggcttcgctgaaagtgagcgggggctcggccggcccaatcgtcaacttcgacggcatc
accaacttcagccagtga
DBGET
integrated database retrieval system
