Heterobasidion irregulare: HETIRDRAFT_123985
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Entry
HETIRDRAFT_123985 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
hir
Heterobasidion irregulare
Pathway
hir03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HETIRDRAFT_123985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_123985
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_123985
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HETIRDRAFT_123985
RNA polymerase I system
HETIRDRAFT_123985
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HETIRDRAFT_123985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
20666856
NCBI-ProteinID:
XP_009544077
JGI:
Hetan2_123985
UniProt:
W4KEX8
LinkDB
All DBs
Position
Unknown
AA seq
120 aa
AA seq
DB search
MAPTASIPPQARARQLRACLLCSIVQTPLDFRRNGCPNCEELMQMKGSPDRIQVCTTTYY
DGIIAVIDPETSWVARWQRTSKYVRGIYAVRVKGRIPEDVEAELESRGIKYRPRDQTEQD
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaccgcttcaattcccccgcaagcacgcgctcgccagttgcgtgcgtgcctc
ctttgctcaattgtccaaacacccctcgacttccggcggaatgggtgtccgaattgtgaa
gagcttatgcagatgaaaggctcgccggatcgcatccaggtctgcacgacaacgtactac
gatggcatcatcgccgtgattgatcccgagacgagctgggtagcaagatggcagcgaaca
tcaaaatatgtacgagggatatacgctgtacgtgtcaaaggtcggatacctgaagacgtg
gaagcggagttggagagccgaggaatcaagtatcgtccgcgcgaccagacagaacaggat
tga
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integrated database retrieval system