KEGG   Heterobasidion irregulare: HETIRDRAFT_123985
Entry
HETIRDRAFT_123985 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
hir  Heterobasidion irregulare
Pathway
hir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    HETIRDRAFT_123985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_123985
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_123985
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     HETIRDRAFT_123985
  RNA polymerase I system
     HETIRDRAFT_123985
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     HETIRDRAFT_123985
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 20666856
NCBI-ProteinID: XP_009544077
JGI: Hetan2_123985
UniProt: W4KEX8
LinkDB
Position
Unknown
AA seq 120 aa
MAPTASIPPQARARQLRACLLCSIVQTPLDFRRNGCPNCEELMQMKGSPDRIQVCTTTYY
DGIIAVIDPETSWVARWQRTSKYVRGIYAVRVKGRIPEDVEAELESRGIKYRPRDQTEQD
NT seq 363 nt   +upstreamnt  +downstreamnt
atggcccccaccgcttcaattcccccgcaagcacgcgctcgccagttgcgtgcgtgcctc
ctttgctcaattgtccaaacacccctcgacttccggcggaatgggtgtccgaattgtgaa
gagcttatgcagatgaaaggctcgccggatcgcatccaggtctgcacgacaacgtactac
gatggcatcatcgccgtgattgatcccgagacgagctgggtagcaagatggcagcgaaca
tcaaaatatgtacgagggatatacgctgtacgtgtcaaaggtcggatacctgaagacgtg
gaagcggagttggagagccgaggaatcaagtatcgtccgcgcgaccagacagaacaggat
tga

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