Heterobasidion irregulare: HETIRDRAFT_126621
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Entry
HETIRDRAFT_126621 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hir
Heterobasidion irregulare
Pathway
hir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HETIRDRAFT_126621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_126621
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HETIRDRAFT_126621
Prokaryotic type
Archaeal type
TFE
HETIRDRAFT_126621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
zf_UBZ
Zn_Ribbon_TF
SVIP
Zn_ribbon_IS1595
Cytochrome_C7
Trm112p
Motif
Other DBs
NCBI-GeneID:
20666949
NCBI-ProteinID:
XP_009549945
JGI:
Hetan2_126621
UniProt:
W4JXW4
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MITDEDKAALRLLVQYVSRAFYEPKFIVVMDQLARHEVLKDDDLAGRMGLQLKELNKLMA
VLEGDRLVQVHRQNELKEGAQRSVGRQYFYVDFQRFCNVVKWRVSEMRRRIDTGLRNELD
NKGYICPRCHKSFAPLEVDKLMDFERGAFICDVCHAELIDNDDAESVRGSQDRMQRFNYQ
MRFIREGLRKSEEMVLPAFDVVQFISKNLASDAASQKGSGEPGRGLKVAGSYGEKRKDEG
VGIVISTDKDEETVRRERDAEAAAKRQQNAMPSWHLKSTITGDLTALGVKENALQVGSAV
NGALVNGHEANGFDESLKGLGRVGGSLNLSAIQPSVDMAVEDVKPDVKQIHEVDYYDHYY
ASLANSAAPSAQNTPSADFAFTTDDFDEDRKPDVDYLDSLNEYRKRSRSREDEGDAERKI
AKTANGVNGVVNGVNGHSGVNGSAMEPEGVSRIGDEEAIEDDPIMLGGCLCPLLFFNGEP
IAFSHVTEEHQELMTPEEYTAYFDVYQARAS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgacgaggacaaggctgccctccgcttgctcgtccaatatgtatcaagagcg
ttctacgagcccaagttcatcgtcgttatggaccagttggcgcgccacgaagtgctcaag
gacgatgatcttgcggggagaatggggctgcagttgaaggagctaaacaagctcatggct
gtactagagggcgaccgattggtccaagttcatcggcagaacgaactcaaggaaggcgct
cagcggtctgtcggcagacaatacttctatgttgactttcagcgtttctgtaacgttgtc
aagtggcgtgtctccgaaatgcgccggcgtattgatactggcttgcgaaatgaactggac
aacaaaggctatatttgtccgcgatgtcataaatcctttgcgccactagaggtcgacaaa
ttaatggactttgagcgtggcgccttcatctgcgacgtttgccacgctgaacttatcgac
aatgacgatgctgagagtgttcgtgggagtcaggacaggatgcaacgatttaattatcag
atgcggtttatcagggaaggtttgaggaagagcgaggaaatggtgctgcctgcatttgat
gtagtacagttcatctcgaagaacctcgcttctgacgcggcatcacaaaaaggatccggc
gagccaggtcgaggcctcaaagtcgctggctcatacggagagaagagaaaggacgaaggg
gttggcatcgtcatctcgacagacaaagacgaagagacagtgcgaagagaacgcgatgcc
gaggcagctgcgaagagacaacagaatgcaatgccgtcgtggcatttgaagagtaccatt
acgggagatctgacagcgttgggagtcaaagagaatgcgctgcaggtagggtctgccgtc
aatggggccttggtaaatgggcatgaagcgaatgggttcgacgagagtctgaaggggctc
ggaagagttgggggctcactgaatttgagtgccattcaaccaagtgtggatatggctgtc
gaagatgtgaagcctgacgtgaagcagatccatgaagtggactactacgaccactactac
gcctcactggccaattctgcagcgccctccgcacagaacacgccgtctgcagatttcgct
ttcactacggatgattttgacgaagatcgaaagcccgatgttgattatcttgactcgctg
aacgaatatagaaagcggtccagatcacgcgaagatgagggtgatgcggagaggaagatc
gcaaagacggcgaacggtgtaaacggtgttgtgaatggtgtgaatggtcacagcggcgtc
aacggatcagcgatggagcccgagggtgtgagcaggataggcgacgaagaagccatagaa
gacgatccaatcatgctaggtgggtgtctttgtccccttctatttttcaatggcgagcct
atagcattctcacatgtgacagaggagcaccaggagttgatgacaccggaggagtacact
gcctacttcgacgtgtatcaagcgcgtgcctcttga
DBGET
integrated database retrieval system
