Heterobasidion irregulare: HETIRDRAFT_127217
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Entry
HETIRDRAFT_127217 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_127217
Transfer RNA biogenesis [BR:
hir03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HETIRDRAFT_127217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
TPR_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_GEMI5
TPR_12
Motif
Other DBs
NCBI-GeneID:
20666980
NCBI-ProteinID:
XP_009553116
JGI:
Hetan2_127217
UniProt:
W4JMC2
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MRNLALLEIYSSQIPKCNITATVVDPEEGLLWAASERLNADSDLQVELWTEKAGKKVETT
RNASPLSCITTFTSATNQSVSDGIPQVASLSLVMDHRSLVLVVRGGDIATMKLDDTDPTF
EVVGSVEDGILAVAWSPDSALLALVTGDRKLILMTSTFDILFEAPLNTEEFGEAAPINVG
WGSQQTQFHGSLGKAAAQTPSPSTLRTVGTSSDDDHIPRISWRGDGSLFVVSSLSSLPPS
STPNALRHRILRIYNREGALQSSSEPVAGLEHTMSWRPSGNLIVGTQRFGSAAGLASGIE
GRHDVVFFERNGLRHGEFTLREKAIEAGAMVPHGRNWGYRVREICWSPDSNVLAIWIEGD
EGDVVQLWAIGNYHWYLKQEVFAPLGEPSQPGRFTSVNWHPENNLELLLTTSTTIMHRTY
KWETFVSRMTQPNDTGSVAVVDGTTILLTPFRTQNVPPPMSSHQLSLNPTPLSPSRRRPT
PIYTSFSPSEDIIAVLWESGYVELWDLHTRLGPGPGKVINPEQLWNGMIDQHSSSRHYKE
ISVWTAPELIQTAGAVARIAVLGYKQEGNDVLQVVEVGKNIFENFATPALKGISWRFVQS
SGPVTCWHQTTIFECTSRITTHLSVASSQKAIDDVAKPVLSSRAELSTACHNVERIQPFS
SSVPLYIGLSASGTISTSTPSAASRILTQNANSFHVASGLIVYTTTAHEAHFISASDLLD
DREITLSERRRIERGSKIVTAVPSTMSLVLQMPRGNLETINPRPMVMKVVKADIDAGSYR
KAFLSCRKHRIDLNVIFDHNPRGFRDNLSSFVEQVNDVDYINLFLASLGSGSQPVEVVAE
LCDLIREELERRDLKKYVNSILTAYVVKRPPAHEAGLGLLLRLRDSDPTLVEEAVKYIIF
LADADTLFNTALGMYDFTLVLMIAQYAQKDPREYLPFLRELRALQPAYQHFRIDDHLKRY
PSALKNLSLAGADHFDEAMSYVEKHQLYESALSIWRKTDQYYTVLSLYGEWLFERGDFKQ
AAIVFIEAEKASKAMVAYEKSLQWRELFELAGSEETIHGSDVISMAYRVADDLTSKKRHS
EASTVLLDYAKDVREAVVALVHGNMFSEARRIATLHARSELLEEIIYPSTLEARAQIAED
IEEMREQLRKQVQRLRELRIKKIEEPESYYGAEDTDLHNVDVMTDASQFTAFTRYTVAPS
TASRTSKRSSRSKRKMERKVGSGRKGTVDEEEYLLKSITKLVGKFTTMQDDASNLIPHLL
HFTADHRTEARLLQNEISDFESELTKVLEEVWIKPLGIAEGEEPQDSWAIRMEEKEKDRE
KAIRDVVKPELKHKDEWRTRLIVIGFDENSNVEG
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctggccttgctagagatatattcatcgcagatcccgaaatgcaatatcacg
gccacagtcgtcgatcccgaagaaggactcttatgggctgcgtccgaacgattgaatgca
gactcggatttgcaggtcgagctctggactgagaaagccggtaaaaaggtggagactact
cgcaatgcttcaccactatcatgtatcaccacattcacctccgcgacgaatcaatccgta
tcagatggaatcccccaggttgcatcgctaagtttggtcatggaccatcgttctttggtt
ctcgtcgtgcgcgggggagacattgctaccatgaagcttgacgatactgatcctacgttt
gaggttgttgggtctgtagaggatggcattctggcagttgcatggagtccggacagcgcc
ttacttgccttggtcactggtgacagaaaactcattctcatgacctcaacttttgatatt
ctttttgaggcacccttgaatacagaagaattcggtgaagctgcccccatcaatgttggc
tggggttcccaacaaacacagttccacggctctcttggcaaagcggctgcacaaactccg
tcgccatctactcttaggacagttgggacctcctcggatgacgatcatattccccgcatt
tcttggcgtggcgacggttccctctttgttgtatcatctctatcttcattgcctccgagc
tctacgcccaacgctctacgccatcgcattctccgcatttacaaccgtgagggagccctc
caatcgagctcagaacctgttgcagggcttgagcacaccatgtcatggcgcccttcaggc
aatcttatcgttgggactcagcgctttggaagtgccgcaggacttgcaagtggaatagaa
ggaagacacgacgttgtgttttttgaaagaaatggcttgagacatggtgaattcacgttg
agagaaaaagccatagaagccggtgccatggtacctcatggtaggaactggggctataga
gtgagagagatatgttggagcccagattccaacgtcttggccatatggatcgaaggagat
gaaggagatgtcgttcagttgtgggcgataggcaactatcactggtatctcaagcaagag
gtctttgcccctctgggcgagccatcgcagcctggaaggtttacttctgtcaattggcat
ccagagaacaacctggaacttttgctcacaacgtcaacgaccatcatgcatcgtacctac
aagtgggaaacatttgtgtctcgtatgacgcaacccaacgatactgggtctgtggctgta
gtagacgggacaaccattcttctgacaccttttcgaacgcaaaatgttcctccgccaatg
tcatcgcatcagctatctctgaaccctacacctctttcgccgtcccgtcgtcggcctact
cccatctatacaagtttctcgccctccgaagacatcatcgccgtcctttgggaaagcgga
tatgtcgaactatgggatcttcacacacgattggggccgggacctgggaaagtcatcaat
ccagaacaactctggaacggaatgatcgatcaacatagttcctcgcggcattacaaagag
atttctgtgtggacggcaccggaacttattcaaaccgctggtgctgtcgcaaggattgct
gtgctgggctataagcaggaaggaaacgatgtcctgcaggtagtagaggtaggcaaaaat
attttcgagaacttcgccactcctgcgcttaagggcatcagttggcggttcgtccaatcc
agtggccctgtcacatgctggcatcagacaacgatatttgaatgtacgtccagaattaca
acccacctttcggtggccagctcacagaaggcaatagatgatgtggcgaagcccgtgctc
agctctcgtgcagaacttagcaccgcgtgtcacaacgtcgaacggattcagcctttttca
agttctgtacccctttacattggcctctcagcctcaggcacaatttcaaccagcacccct
tctgccgcatcccgcatcttaacacaaaacgcgaactcttttcatgttgcttcagggtta
attgtgtacacgacgacagcccatgaagcccacttcatttctgcttctgacttactagac
gacagggaaatcacgctatctgaacgccgccgcatagaaagaggttctaagatcgtaacg
gcggtgcctagcactatgagcctcgtgttgcagatgcctcgaggcaatctagaaacaatc
aatcctcgcccaatggttatgaaggttgttaaagctgatattgacgcggggagctaccgc
aaggcattcttatcgtgcagaaaacatcgcatcgacctcaatgtcatatttgatcacaat
cctcgtggatttagggataatctttcttcgttcgtggaacaagttaacgatgttgactac
atcaacttgttccttgcaagcctcgggagtggctctcaacccgtagaggtcgtcgcggag
ctctgcgatcttattcgagaagaactcgaacgacgggacctcaaaaaatatgtaaattcg
atcttgacagcatatgtagtaaagcgacccccagcccacgaagctggacttgggctacta
ctccgtttgcgagatagtgatccgacattagtagaagaagctgtcaagtacataatattc
ctagcggatgcggatactttattcaatacggcgcttgggatgtacgacttcacgcttgtg
ctcatgattgcacagtatgcgcaaaaggatccgcgagaatacctccctttccttagagaa
ctacgagctttgcaaccagcatatcaacactttcggattgatgatcatctgaagcgttat
ccaagtgctttgaagaacctcagtcttgccggggccgatcattttgatgaggccatgtcg
tatgtcgagaagcatcagttatacgagtctgctttatcaatctggcgaaaaacagatcaa
tattatacagttttgagtctttatggcgaatggcttttcgagcggggagatttcaagcag
gctgctattgtatttattgaagcggaaaaggcgtcaaaggccatggttgcgtatgaaaaa
tctttgcaatggagagaattatttgagctggctggaagtgaggaaaccatccatggctcg
gacgttatttcgatggcgtatcgtgtggcggatgacttaacgtccaagaaaaggcactca
gaagcgagcactgtcctcctggactatgccaaggacgtccgtgaagcagtagttgccctc
gttcatggtaacatgttctccgaggcacgtcgaatagcaacactccacgcacgctcagaa
ctgttagaagagatcatttatcccagcactctcgaagctcgcgcacagattgcggaagac
attgaggagatgcgtgagcagctgcgtaaacaggtccagcgtttgcgtgagctccgcatc
aagaagatagaagagcctgagtcatattacggcgccgaagatactgatctgcataatgtt
gatgttatgactgacgcctcgcagttcactgcgtttacgaggtatactgtagccccatcg
accgcgtcgcgaacatcgaaacggagctcgcgctcgaagcggaaaatggaacgcaaggtt
ggatctggccggaagggcactgtcgatgaagaggaatacctgctcaaatctatcacgaaa
ctcgtggggaaattcactaccatgcaagatgacgctagtaaccttatccctcacctgctg
catttcaccgccgatcatcggacagaggctcgtttactgcaaaacgagatcagtgatttc
gagtcggagctgacaaaggtattggaggaagtgtggataaaaccactcggaatcgcagag
ggtgaggaacctcaggatagttgggcaattcgtatggaagaaaaagagaaagaccgagag
aaggccatccgagacgtggtcaaacccgagctaaagcacaaggacgagtggaggacgagg
ctgattgttattgggtttgatgaaaactcgaatgttgaaggctga
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