Heterobasidion irregulare: HETIRDRAFT_152464
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Entry
HETIRDRAFT_152464 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
hir
Heterobasidion irregulare
Pathway
hir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HETIRDRAFT_152464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_152464
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HETIRDRAFT_152464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
20667410
NCBI-ProteinID:
XP_009552132
JGI:
Hetan2_152464
UniProt:
W4JQQ3
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MALMYGKEKDDNDLDTTDPGFCTFFSKLPAKSPDTTGTVRLFSRYANNDNFYTAHGPDAL
YIAQHVFHTNSVLKYLGAGGRQAGLPSVNLSSSVAKTFLREALTVKQLKVEIWVPEPGQG
RKAKKFVLDKEASPGNLSAVEDLLFIDNDILSAPMVMAIKISSTPSVPGSSSKVKNKTVG
IAFADSSTRQLGVADFVDNDLFSNTETLVIQLGVKEALITTGTASGSTDRDFDLKKLKDV
LDRCGVVVTERKPSEFTAKHVDQDLTCLLAATPSVTADVSTVIPQLSLPTAPGALAGLLI
YLSLLSDSSNHGAWTIRTHDLDQYMRLDASALRALNLVEVGGGTSTRNTTLLGLLNKCKT
AQGTRMLGSWLKQPLVNRHEILKKQDLVETFVEDGNARKTLQDDFMKLMPDMHRISKRFQ
KSVASLEDVVRVYQAVLKLKGLIETLKHVDTRTDRAKELIDEMYLTHFEKYSESLEKYAE
MVEQTLDLTELERHNFVIKPDYDERLQNLADKLFEVRDGLDTEHAEVGTDLGLELDKKLH
LENSATYGYCFRLTKNDAKAIQNKRKYIELGTIKSGVYFTTTGLKELAEEYQNATQAYSK
TQSGLVKEVSVIHDNNLDVDLARLLATYTPVLEALNGNLAHLDVILRLVVFPPPVAVSAP
EQYVKPIVVEKGAGDLVLKEARHPCLEVQDDMSFIPNDVEMIKDKSEFQIITGPNMGGKS
TYIRQVGVIALMAQTGSFVPCSEAQIPIFDSILCRVGAGDSQLKGISTFMAEMLETATIL
KSATKDSLIIIDELGRGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQELSH
VQNLHVVAHVSDSSETSKEKDITLLYKVEPGVSDQSFGIHVAELANFPESVVKLARRTAD
ELEDFKVDESSKDGDFSPEVTEEGIKIVEDLLKTWASRTSSSSMDDGEDVIMSDELSPQA
QLEELKTCFAEIQPRIDGNPWVQSLLASL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatgtatggaaaagaaaaggatgacaatgatctggatactacagaccctggc
ttctgcacgttcttctctaagctgcccgcaaaatctccagacacgacgggaactgtgcga
ctcttctctcggtatgctaacaacgataacttctacaccgcgcatgggccggatgcgctt
tacatcgctcaacacgtgttccacaccaactcggtgctaaagtatctcggggcaggcgga
cggcaggcaggactgcccagcgtgaatttaagctcgagtgtggcaaaaacattcctgcgg
gaggccctcacagtcaaacagttgaaggtggagatatgggtgccagagcctgggcaggga
agaaaggcgaaaaagttcgtattggacaaagaggcatcccctggcaacctctcggctgtc
gaagaccttttgttcatcgacaatgatatcctatcagcaccgatggtcatggctatcaaa
atctcttccacgccgtctgttccagggtcttcgagcaaagtcaagaataagacagtcggt
atcgcgttcgctgactccagcactcgccagctcggagtcgcggattttgtggacaatgac
ctgttctcgaacaccgaaacactcgtaattcagctgggcgtgaaagaggctttgataacc
acagggaccgcatcgggctcaacagatcgagattttgacctcaagaagctcaaagatgta
cttgatcgctgtggagtggtcgtcactgagaggaaacccagtgaattcaccgcgaagcat
gtcgatcaagacctcacttgccttctcgctgccaccccttctgtaacagctgacgtgtcg
actgtgattccgcaactgagcctaccgactgcaccaggcgctctggcgggcctactcatc
tatctatctctcttatctgactcttcgaatcacggtgcgtggacgatccgcacgcacgat
ctcgaccaatatatgcgcctcgacgccagtgcactgcgtgcgttgaaccttgtcgaggtt
ggagggggcacgtcgacgagaaacaccacgctgctgggcctattgaacaaatgcaaaacc
gcgcagggtactcgtatgcttggcagctggctgaaacagcccctcgtcaatagacacgaa
atattgaaaaagcaggatttggtcgagacctttgtcgaggatggaaacgcgcgaaagaca
cttcaggacgacttcatgaagttaatgccggatatgcatcgtatcagcaagcggtttcag
aaatccgtggcatcgctagaagatgtcgtgcgcgtgtatcaggctgtgctcaaactcaag
ggattgatagagacactcaagcacgtagatacaagaaccgaccgtgcaaaagagctcatc
gatgagatgtaccttacacacttcgagaaatactccgagtcgcttgaaaagtacgccgag
atggtcgagcagacactcgacctcaccgagctcgaacggcacaattttgtgattaaaccc
gactatgacgagcgattgcagaatctagcggacaaattgttcgaggtccgtgatgggctg
gacacggagcatgccgaagtcggcacggacctggggctggagcttgacaagaagcttcat
ctggaaaattcagcgacttatggttactgtttccgtttgacgaaaaacgatgccaaggcg
atacaaaacaagcgcaagtatattgagcttgggacgataaaatcaggggtatacttcacg
acgacaggattgaaggaacttgccgaggagtatcaaaatgcgacgcaggcgtattcaaaa
acgcagagtgggttggtcaaagaagtttctgtaatccatgataataacctcgacgttgac
ctggcgcgattgctagcaacatacacaccggtactagaggcgctcaatggcaatcttgca
cacctggacgtcatattaaggcttgtcgtgtttcctcctccggtggcagtaagcgcgccg
gagcagtatgtcaagcccatagtggtcgagaaaggagcaggagaccttgttttgaaagaa
gctcggcatccctgtcttgaagtccaagatgacatgagcttcataccaaatgatgtagag
atgataaaggacaaaagtgaattccagattattaccgggcctaatatgggcggaaagagc
acttatatccgacaggttggcgtgattgcgctcatggcgcaaacgggctcgttcgtgcct
tgctcggaggcacaaatacccatctttgattctatcctgtgtcgtgtgggcgcaggggac
agtcagctgaaagggatctccacgttcatggcggagatgttagagactgctacgatcttg
aagtctgccaccaaagattcgttaattatcatcgatgagcttggtagaggcacatcaacc
tatgatggcttcggacttgcatgggcaatttcagagcacatcgcgtcgcagattcacgct
ttttgcctcttcgcaacccacttccacgagctcaccgctctcgaccaagagctatcgcat
gtgcaaaacttgcatgtcgttgcgcatgtgtccgactcttccgagacatcgaaagagaag
gacatcacgttgctgtacaaagtcgaacccggtgtcagcgatcaaagtttcggtattcat
gtggcggagctggctaatttcccggaatccgtagtcaagcttgcgcggcgcacggccgat
gagcttgaggacttcaaagtcgatgagtcgtcaaaagatggagatttctcaccagaggtc
acagaagaaggcatcaagatagttgaagatctacttaagacctgggcttcacgtacttcg
tcttcatccatggacgacggcgaggatgtaatcatgtccgatgaactgtcaccacaagcc
cagttagaagaactcaaaacgtgcttcgctgagattcagccacgcattgatggaaatcca
tgggtccaatctcttctcgcctcgttatag
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