Heterobasidion irregulare: HETIRDRAFT_153488
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Entry
HETIRDRAFT_153488 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hir
Heterobasidion irregulare
Pathway
hir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HETIRDRAFT_153488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_153488
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_153488
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
HETIRDRAFT_153488
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
HETIRDRAFT_153488
RSF complex
HETIRDRAFT_153488
WICH complex
HETIRDRAFT_153488
B-WICH complex
HETIRDRAFT_153488
NORC complex
HETIRDRAFT_153488
BRF complex
HETIRDRAFT_153488
NuRF complex (fruit fly)
HETIRDRAFT_153488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
DBINO
AAA_14
UVB_sens_C
Motif
Other DBs
NCBI-GeneID:
20667434
NCBI-ProteinID:
XP_009540443
JGI:
Hetan2_153488
UniProt:
W4KKP4
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MATLSAQRDDDILSDVVPSNIVSRQETPGEGVESEYAEDVQEEDELISEAEDDGPSSSQA
NKSKDIADRQQKKQKRKAAEGKLQEKRHEMDKVKMADAIKRYSYLLGQTDLFRHFVDMKR
ARDPEYAALMDAQPKPKGRGRKKAIDKNARHRKSEKEEDEEMLKDGEMAADGKDQPYVFE
ESPSFISGLMRSYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHQTDTPG
PHLIVVPKSTLQNWAREFQQWAPDFSVVVLSGSKEERAEIIANRLIPQDFQVCVTSYEIC
LIEKSALKKFSFEYIVIDEAHRIKNVDSLLSQIVRAFLSRGRLLITGTPLQNNLKELFAL
LNFICPEIFSDYSDLESFLHKDDSNVTDDEEKSKKVVEALHKILRPFLLRRVKSDVEKNL
LPKKEINIYVGLTEMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNMVMQLRKVTCHPYL
FDGAEPGPPYTTDEHLINNSGKMIILDKLLQSMHEKGSRVLIFSQMSRVLDILEDYCLFR
GFKYCRIDGSTAHEDRIAAIDDYNKPGSEKFIFLLTTRAGGLGINLTTADIVVLYDSDWN
PQADLQAMDRAHRIGQTKQVYVFRFVTEETVEERMLERAAQKLRLDQLVIQQGRQQQSKA
ANKEELLEMITHGAEKLVNSNNSFIIDGDIDEIIHRGEERTAELNSKYEGLNLEDLSNFK
SENTVQQWDGEDFRTGQRKSLNLNMLSLSKRERKLNYSVDSYFKETMRAGPSKTEKGPKV
PRAPKQIQIQDFQFFPPRLAELQEQELAAHKRLNDIPATTREAGPDDTPESLEAERQAAQ
EFIDNAESLTEEELAEKWQLIQEGFEDWSRRDFQQFVRALETHGWTNDFELLASEIQDKT
ADDVAIYYPVFKKKWKELSEYPRIAARISEGEVKRTKRSNLELLLYKKIESVNYPMQELE
LNYPTTKGKVYSEEEDRYLLCRLNHYGMRADDVYERIKRDITEFPVFRFDWFFKSRSPQE
LQRRCNTLLGMIEKEAEVKQEEMKKGSASRGKKRSIDEVQKSEKASRSSTPASSMVTTAA
KRPYKKKRA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggccactttgagtgcccagcgtgatgatgacatcctgagtgatgttgtcccgagcaat
attgtttcgcgtcaggaaacacctggagaaggtgtcgaaagcgagtacgccgaagatgtg
caggaggaagatgagttgatcagcgaagctgaggacgacggtccatcatcgtcacaagca
aacaaatctaaggatattgccgaccgccaacagaagaagcagaaacgaaaggccgcggag
ggcaagcttcaagagaaacggcacgagatggataaagtaaagatggcggatgcgatcaag
cgctactcgtatctcctgggtcaaacagacttattccgtcatttcgtcgatatgaagaga
gctcgtgatcctgagtatgcagcgctgatggatgcgcagccaaagccgaaaggcagaggg
aggaagaaggctatagacaagaacgcgcgccatcgaaaatcggaaaaggaagaagacgag
gaaatgcttaaggatggagaaatggctgcggacggcaaagatcagccatatgtgtttgag
gagtcgcccagtttcattagcgggttgatgaggtcctaccagctgcaaggcctcaactgg
atggtctctctacatcacaacggtctgaacggtatcctcgctgatgaaatgggtcttgga
aaaaccctccaaacgatctcgtttcttgcttacttgaagcatcagacggatacacccggg
ccacaccttattgttgttccaaaatccactctccaaaattgggcccgagaattccagcaa
tgggccccggacttcagcgtcgtcgtcctctccggcagcaaagaggagcgcgcagaaatc
attgccaaccgcctgattccccaagactttcaagtctgtgtcacatcctacgaaatatgc
ctcatcgagaagagcgcactcaagaaatttagcttcgaatacatcgtcatcgacgaggcg
catcgaatcaagaacgttgactcgcttctttcgcagatcgttcgcgcgtttttgtctcgg
ggaaggctgttgatcacaggcacaccgttacagaacaacctcaaagagctgtttgctctg
ttgaacttcatttgtcccgagatcttctcagattatagcgacttggagagtttcctccac
aaggacgattcgaacgtcacggacgacgaggagaagagcaagaaagtcgttgaggcgcta
cacaaaattctacggccgttcttgttgcggagggtgaagagtgacgtcgagaagaacctt
ttgcctaagaaggagatcaatatctacgttggcctgacagagatgcaacggaagtggtat
cgctccgtcctggagaaggacattgacgccgtaaacggtttgacgggtaaaaaggagggg
aagacgagattgatgaatatggtcatgcaattacgaaaggtcacatgccacccgtacctt
ttcgatggcgcggaacctggccctccgtacacaactgacgagcatttgatcaataacagc
gggaaaatgatcatcttggacaagttgctccagtccatgcacgagaaaggctctcgcgtt
ctcatcttcagtcaaatgagtcgagtgttggacatccttgaggactattgtcttttccgg
ggattcaaatattgccgtatcgatggaagcactgcccatgaagatcgtattgctgcgatc
gacgattacaacaaacccggcagcgagaagttcattttcctgctcacgactcgtgccgga
ggtctgggcatcaacttgacgaccgctgatatcgttgtgttgtacgacagcgactggaat
ccgcaagctgaccttcaagcaatggatcgtgcccaccgtatcggtcagacaaaacaagtc
tacgttttccggtttgtcaccgaggaaaccgtcgaggaacgtatgcttgagagggctgcg
cagaagttgcgtctagatcagttggtcatccagcaggggcgccagcaacagagcaaagct
gcgaataaggaggagctcttagaaatgattacgcacggcgctgagaaattagtgaattcc
aacaactctttcattatcgacggagatattgacgagatcatacaccggggcgaagagcgt
acggctgagctcaacagcaagtacgagggtctcaacctcgaggatctcagcaacttcaaa
tctgagaacacggtccagcagtgggatggggaggatttccgaacaggacaacggaagtct
ttgaacttgaacatgttgtcgctgtcgaagagggagcgcaagctcaactactccgtggac
agctacttcaaggagaccatgcgcgctggaccgtctaaaacagagaagggccctaaagtc
ccgagggcgccgaagcagattcaaatacaggatttccagttcttccctcctcgtcttgcg
gaactccaggagcaagagctggccgctcataagaggttgaacgacattcctgccacaacg
cgggaggccgggccagacgatactcccgagtcgttggaggcagagcggcaggccgcgcag
gagttcatcgacaacgcggaatctctgacggaagaagagctggcggagaagtggcagttg
atccaggagggtttcgaagactggagccggcgcgacttccaacaatttgttcgcgcgttg
gaaacccatggatggacgaacgactttgagctgctggcgtccgagatccaagataagacc
gccgacgacgtcgcgatatactaccccgtcttcaagaagaagtggaaggagctgtccgaa
tacccgcgcatcgccgcacgcatcagcgagggcgaagtgaagcgcacgaagcgctcgaac
ctcgagctcctcctctacaagaagatcgagtcggtcaactacccgatgcaggagctcgag
ctcaactacccgacgacgaagggcaaggtgtacagcgaggaggaggaccgctacctcctc
tgccggctgaaccactacggcatgcgcgccgacgacgtctacgagcgcatcaagcgcgac
atcaccgagttccccgtcttccgcttcgattggttcttcaagagccgctcgccgcaggag
ctgcagcgccggtgcaacacgctgctcggcatgatcgagaaggaggcagaggtcaagcag
gaggagatgaagaagggcagcgcctcgcgcggcaagaaacgtagcatcgatgaagtccag
aaatcagaaaaggcgtcgcggtcgtcgacgcctgcgagctcaatggtcaccacagccgcc
aagcggccatacaagaaaaagagagcatag
DBGET
integrated database retrieval system
