Heterobasidion irregulare: HETIRDRAFT_153622 Help Entry HETIRDRAFT_153622 CDS       T03455                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism hir  Heterobasidion irregulare Pathway hir03018   RNA degradation Brite KEGG Orthology (KO) [BR:hir00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     HETIRDRAFT_153622  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hir03019]     HETIRDRAFT_153622 Enzymes [BR:hir01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      HETIRDRAFT_153622 Messenger RNA biogenesis [BR:hir03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      HETIRDRAFT_153622   mRNA degradation factors    3'-5' decay     Ski complex      HETIRDRAFT_153622 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk ResIII DEXQc_Suv3 Helicase_C Ntox28 ATPase_2 Motif Other DBs NCBI-GeneID:  20667443 NCBI-ProteinID:  XP_009540784 JGI:  Hetan2_153622 UniProt:  W4KN62 LinkDB All DBs Position Unknown AA seq 1212 aa AA seqDB search MTDLARDEVIDSIVNPRPENAQKLLVSLGFDRLPSREQVHRNIEEKFLLPKDQLPEDWLP DYQIHWEHSISVPSLLARSPAPPPTSLSFVRAGLHGRVTGYAETPNPPVRTGLTSTSIDR APGPNKNFVRGKSGYVPFWPGGLESLVPVLKEDESDTDSKGLRTTPPGLSRGLRLPGDGQ DDEYLSEINAISKKSSRNDYERSHLSPISSPHKPVRKVKIQKRDWAHVIDINKPMKNFHT LVPEMAHKYPFELDTFQKEAVYHLEMGNSVFVAAHTSAGKTVVAEYAIALAEKHMTRAIY TSPIKALSNQKFRDFKQTFSSNSVGILTGDVQINPEANCLVMTTEILRSMLYKGADLIRD VEFVIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNAREFADWVGRTKKKDIY VIYTAKRPVPLEHYLYAGREMHKIVDANRNFVADGYKSAGEALRRKQDKEREAAGLPPVQ RVGARGAAPQRGQRGAAGGRGGVSPRGGQARGGQARGAPIARGGGSSRTFHQVDKSLYVH LLGHLRKSALLPVVVFTLSKKRCEENAGSLSNLDLCSAVEKSEVHVAIEKAVARLKGSDK RLPQISRMKDLLSRGIGVHHGGLLPIVKEVVEILFARGLVKVLFATETFAMGVNMPAKCV VFSSIRKHDGRSFRDILPGEYTQMAGRAGRRGLDTTGTVIIISGDQLPEQTALQLMILGK PGKLNSQFRLTYNMILNLLRVEALKVEEMIKRSFSENASQKLLPDQQLKVAESEQKLSTL QKLQCDVCSDDINAYYDASTDLVDFTQTLLTIVANTPQGSKYFTPGRAVILRDGHFRWSA AVLLKPTASKEKVKTFWVLARVDQETKSGKNDVDTQLVPPRWQADPQILQIDDAVYELVA APITSISMVTDRIVKVDVDAIVERHKTSPMNEVIASLKDLIDKWISMGTVPEAPWPRMRA LEFQEVLQSRSQALQRIQSSSCTLCSDFDHHYTLLHAEKTLRANIANLKLAISDQNLELI PDYEQRIEVLKELKFIDNNSTVHLKGRVACEINSVNELILTELILDNTLATYEPEEVVAL LSSFVFQEKTDSEPLISPRLEEGRAAILTIADRIGRVQDRHKVAADDFRSSLKFGLMEVV YEWAQGMPFEKLTDLTDVPEGTIVRVINRLDETCREVRDAARVIGDTELMKKMEEAQNKI KRDIVFAASLYF NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atgacagaccttgctcgcgatgaagtcattgacagcatagtgaatccacgaccggaaaat gctcaaaagcttctagtcagcctcggttttgacagacttccatctcgtgaacaagttcat cgtaatatcgaggaaaagttccttctaccaaaagatcagcttcctgaggattggcttccg gactatcagattcactgggaacattcgatatctgtcccttcgttactggcgcgatctccc gctccaccgccgacctcactatcgtttgtaagagcaggccttcatggaagagtgaccggg tacgccgagacgcccaacccacctgtccgcactggtctcacatctacatccatcgatcgg gcaccggggccgaacaagaatttcgtcaggggaaaatctggatacgttcctttttggcca ggcggtctcgagagtctcgtcccagtgctgaaggaagatgagtccgatacggattcgaaa ggccttcggaccactcctccaggactttcgcgggggcttcgtcttcctggggatggtcaa gatgacgaatatctttctgaaataaatgcgatatccaaaaaatcatcacggaacgattac gagagatcacacctcagtcctatctcctcgccacataaacctgtccgaaaggtgaagatt cagaagcgagattgggcgcatgtcatcgatatcaacaaaccaatgaaaaacttccacaca ctcgttcccgagatggcacacaaataccccttcgagttggacaccttccagaaggaagct gtctatcacctcgagatgggaaactcagtatttgtcgctgcacatacttctgctggaaaa actgtggtcgccgagtacgccatcgctcttgcagaaaagcacatgactagagccatttat acgtctccaatcaaggcgctttcaaatcagaagttccgagacttcaagcagacgttctcg tcaaactctgttggaatcctcacgggagacgtccaaataaatccagaggctaactgtctt gttatgacgactgaaatcctgcgtagcatgctctacaaaggcgccgacctgatacgtgac gtcgaattcgtcatcttcgatgaggtgcattatgtgaacgatgctgagcgtggtgttgta tgggaggaagtcatcatcatgttgccggatcatgtgaatataattctgctatccgccact gtaccaaatgcgagagagttcgcagattgggttggccgcacgaagaaaaaagacatatat gtcatatacacggccaagcgtcctgtgccactcgaacactacttatatgcagggcgggag atgcacaaaattgttgatgcaaatcgaaactttgtagcggatgggtacaaaagtgcaggc gaagcgcttcgaagaaaacaagacaaggaacgtgaggcagcgggactaccaccggtccag cgggtaggtgccaggggtgcagcgccccagagaggtcaacgtggagcagcaggtgggcgc ggaggtgtttctcctcgtggtggacaagcccgagggggacaggcccgaggagctccaatt gcacgcggaggaggatcatcacgaacattccatcaagtcgacaagagtctttatgttcat ttactaggccacctgcggaagagtgcacttctaccggttgtcgtgtttacactctcaaag aaacgatgcgaagagaacgctggttcgttatcgaatctggacctctgctcagccgtcgaa aagagcgaggtacatgtcgccattgagaaggctgtggcacgattgaagggaagcgacaaa agattgccccaaatttccagaatgaaggacttgctgtcgcgaggaataggtgtgcatcat ggagggctattgcccatcgtcaaggaggttgttgaaatcttgtttgctcgtggtctagtc aaggttttatttgcgaccgagacctttgcgatgggcgtgaacatgcctgcaaaatgtgtt gtgttttcaagcattcgcaagcacgatgggcgcagtttccgagatattctacctggcgaa tacactcagatggctggtcgagcgggtcgacgaggtcttgataccacaggaaccgtcata attatctctggcgatcaactacccgagcaaaccgcactacagctcatgatactgggaaaa cctggaaagctgaactctcaatttcgcctcacctacaacatgattctcaatcttttgcgc gtcgaagcgctaaaggtcgaagaaatgatcaaacgtagtttttcagaaaacgcttcccag aaactgctacctgaccagcaactgaaggtcgccgaaagtgaacagaaactttcgacactc caaaagttgcaatgtgacgtctgctcagatgacatcaacgcttactatgatgcttcaacg gatttagttgacttcacgcaaacccttttgactattgtcgccaatacaccacaaggttca aaatacttcacaccaggacgagctgtcatcctgagagatgggcatttcagatggagtgca gccgtattgctcaagcccactgcctccaaagaaaaggtgaaaaccttctgggtgctagct cgggtagatcaagagacgaagagcgggaagaatgatgtcgacacgcagcttgtcccacca cgatggcaggccgaccctcaaattctacagatcgatgatgccgtttacgagttggtggca gccccgattaccagtatatctatggtgacagatcgtatagtgaaggttgatgtagatgct attgtcgaacgacataagacctcgccaatgaatgaggttattgcttctctcaaagacttg atcgacaaatggatatcaatgggtacggtgcccgaggcaccctggcctcgtatgcgagct ctcgagtttcaagaagtgctgcaatcgagaagtcaagccctgcagcgaatacaaagctcg tcttgcacgctttgcagcgatttcgatcatcattacacgctactccatgccgagaagaca ttacgagccaatatcgcgaacctcaaactggccatctcggatcaaaatttggagctcatc ccagactatgagcagcgtatcgaagtgctcaaagagctgaaattcattgataataattca acagttcatctgaaaggacgtgtagcttgtgagatcaactcggtaaacgagctgattctt acggaactgattcttgacaatactctcgctacatatgagccggaagaagtcgtcgccctt ctgtcgtcatttgtattccaggagaagactgattcagagccgttgatatcaccgaggttg gaggagggtcgagctgccattctgactatcgcagatcggatcggcagggtccaagaccga cataaggtcgcagcagatgacttcaggtccagcttgaagtttggcctcatggaggttgtt tatgaatgggcccagggcatgccattcgagaaattgactgatctgacggacgtgcccgag gggaccattgtacgagtaatcaacaggttagacgaaacttgcagggaggttagggatgcg gcgcgagtcatcggagacacagaactcatgaaaaagatggaggaggcgcagaacaagatc aagagagatatcgtgtttgcagcaagtctgtatttctag

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