Heterobasidion irregulare: HETIRDRAFT_154768
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Entry
HETIRDRAFT_154768 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_154768
03015 mRNA surveillance pathway
HETIRDRAFT_154768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_154768
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HETIRDRAFT_154768
mRNA cycle factors
P-body specific factors
HETIRDRAFT_154768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
20667521
NCBI-ProteinID:
XP_009547104
JGI:
Hetan2_154768
UniProt:
W4K3G0
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MNIKVDEEHSRHVKRAQLKQLNDDRAGESEVQLASIGVLLLTRKRTVELAKALDSSLKRH
TALIKRIKQSMGVDNHDQILKDIDTLSLEKYIDEIAGAVTEGIVRCKLEKDVWSAAEVIS
ALHRRFPKAFTPVLVSSLAAALAPPPRAALAAMAPEQREKEDTTRVSRQRPVLRVCSELS
LVGIIRDGPGRSGGEWTMKALKDLLSNDPSLSSLPLLTTFLKSFSRPFLGLTPPSSKQIS
ANAEPGTLSSETTSHENNSISLTVKEEEELVEKDIRERFKKMCEGYFDNVSKKLVIEHKR
LQEQDRRNHEAYIRSGEIFEDRQQAYEKMTKNYDKLLASCQTLSELLYLPLPSLPTSSHA
SSSIQIGNNTGSILNDDAEELALAASGGKWEDEEERRFFEDIQDLREVVPKSILGVEDGK
DEKEEKGEEEVERARKAEEEEVRKLEEELAGLKDKEHEGPSQLLTALLARLPDCTNRSLI
DQAALEFAFLNSKAARKRLVKFLSQVPKNRTDVLPHYSRLVATLDKYMPDIGADLIAALD
EEFRYLQRKKNVVKELAEVRLKNITFLSNLTKFRVVPPHLILHMFKVCLDDFSGTNVDNI
ALLLEGCGRFLLRDDETKQRFGTMLELMKRKQSLQHFDQRQQLVLENAYYQANPPERAPR
QEKERTPMDLFTRHLIYDVLAKKTIDKVLKLIRKLDWDDPAIWRTLHKVFTKPHKLRYSN
ISLLAMLTYDLQRYHPDFAIAVIDQVLEDVRRGLEQNVYSTNQRRVATLKYLGELYIYRL
IGSSLVFDTLWSLVTFGHPEGHPLPRYPCPIDMPDDFFRVRLVCVLLDTCGMCFDRGSQK
KKLDNFLTFFQYYVLCKESLPMDVEFMLTDSLEAIRPKLALFKTLEEAAVAVEEMFALAF
QTAGLTAGEDSGEDSGDEGERIGKEDDEDGEEGEATESSVEDRGPSPEPVVVKPAQENLG
PSEEAEAEFAKELAKMVTDSSAESRKVDRRTAQTLWESAVLQPGTRKKRAEDEDEENGDV
EVTGPGMMNFTMITKRGNKQQARVLAIPAESALAVQTRTAQMQDKVEQQHLKRLVLNYEQ
REEAEELKALESKNRAVKIRLVG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaggtcgatgaagagcactctcgccatgtcaagcgcgcgcagctcaaacaa
ttgaatgatgatcgagctggcgaaagtgaggttcaacttgcatcgattggggtgctgtta
ttgacaagaaaacgaactgtagagcttgcgaaagctctggactcgtctctaaagcgccac
acggcacttatcaagaggattaaacagtctatgggcgtggacaatcatgatcaaattctg
aaggatatcgacaccctttctctggagaagtacattgatgagattgcgggtgctgtgaca
gaaggcattgtcagatgcaagctcgaaaaggatgtgtggagcgctgcggaggtcatatct
gctctgcacagacgtttcccgaaggcatttacgcccgtgctggtctcgtctctcgcagcc
gccttggcgcctcccccgcgcgcggcgcttgccgcgatggcgcctgaacagagggagaag
gaggatacgacgagagtgtcaagacagcggcccgtcttgcgggtgtgctcagaactctcc
cttgttgggataatcagggatggccccggcaggagtggtggagagtggaccatgaaggca
ctaaaagatctgctctcgaacgacccctccctgtcgtctttgccccttctaacaaccttt
ctcaaatccttctctagaccatttcttggtcttaccccgccgtcgtctaagcaaatctct
gctaatgccgaaccagggacgctatcctctgaaacgacctctcatgagaataattcgatc
tccctgacagtgaaagaagaggaggagcttgtagagaaagacatcagggaacggttcaaa
aagatgtgcgaggggtactttgataatgtctcgaagaagctcgtcattgagcacaaacgt
ttgcaagaacaagatcgccgaaatcacgaagcatacattcgctcaggagagatctttgag
gacaggcagcaagcgtacgagaagatgacgaagaactacgataaattgcttgccagctgc
cagaccctttctgagttgctttatttgcctctcccatctctcccaacttcctcccacgca
agcagttccattcagataggaaacaacaccggatcaatactgaatgatgatgcggaagag
cttgctttggcagcatccggtggtaaatgggaggatgaagaagagcgccgctttttcgag
gacatccaggatttgcgagaggtagtccctaaaagtatcctaggcgtcgaggatgggaaa
gatgagaaggaggagaagggagaagaggaagtcgagagggcgcgcaaagccgaggaagag
gaggtgcgcaagttagaggaggagctggctgggctgaaggataaggagcacgagggtcca
tctcagctgctcacagccctattggctcgtcttcccgattgtaccaatcgctcgttaatc
gatcaagcagcactcgagtttgcgttcttgaactccaaggcagcgaggaagaggcttgtc
aaatttttgtcgcaagtgccgaaaaatcggacagacgtgctgccacactactcccgactt
gtcgcgactttggacaaatacatgccagacatcggcgcggacttgatagctgccttggac
gaggaattccgatatctccaaaggaagaagaacgtcgttaaggaactcgctgaagtccga
ttgaagaatattacattcctgtccaatttgacaaagttcagagtcgtacccccgcacctt
atcttgcacatgttcaaagtctgtttggatgacttttctgggacgaacgtggacaatatt
gcgttacttctggagggatgtgggcgctttttgctgcgagatgacgaaacaaagcagcga
tttggcacgatgttggagctcatgaagcgaaagcaaagcttgcaacatttcgatcaaaga
cagcagctcgtactcgagaacgcatattatcaggctaatccaccagaacgagccccgcgt
caggagaaagagcgcacaccaatggacctctttacccgacatctcatctatgatgttctc
gccaagaagaccatcgataaggttctgaaactcatccgcaaacttgactgggacgatcct
gcaatttggcgcaccttgcacaaagtcttcaccaaaccgcacaagcttcgctatagtaat
atatctcttctggcgatgctcacatatgacttgcaacgctaccatcctgattttgcgata
gcggtcattgaccaagtgctcgaggacgtgcgccgtgggctagagcagaacgtgtacagc
accaaccaacgcagggtggcgactttgaaatatctgggggagctctatatttacagacta
attggctctagcttggtgttcgacacgttgtggtcgctggtcacctttgggcatcccgag
ggacatccgctgccccggtatccgtgcccgattgatatgccagacgacttcttccgggtt
cgcctcgtctgcgttttgctggatacgtgcggcatgtgctttgatcgtggatcgcagaag
aagaagctcgacaatttcctcacgttcttccagtactatgttctgtgcaaagaatcgcta
cccatggatgtagagtttatgctaacggattcattggaggctatcagaccgaagttggcc
ttgttcaagaccttggaagaggccgctgtcgctgtggaagagatgtttgctcttgcattc
caaactgctggtcttactgccggtgaagacagcggcgaagacagtggagatgagggtgaa
agaattggcaaagaagacgacgaggatggcgaggagggcgaagcaacagagtcttctgtt
gaagaccgtggcccttcacctgagcctgtcgtagtcaagcctgcgcaagagaacttaggt
ccttcggaggaggctgaagccgagtttgctaaagagcttgcaaagatggtgacggattct
tcggcagagtcacgcaaggtcgatcgtcgcacggcgcagacgttatgggaatctgcggtc
ttgcaacctggtacccggaagaagcgcgcagaggacgaagacgaggagaatggtgacgta
gaagtcacagggcctggcatgatgaatttcactatgatcaccaagcgaggcaacaagcag
caggcccgcgtccttgctatccccgcagagtctgcgcttgcggtgcagacacggacggcc
caaatgcaggacaaggtagagcagcagcacctcaagcgcttggtgctgaactacgaacag
cgagaagaagccgaggagctgaaagccctcgagagcaagaaccgtgctgtcaaaattcgt
cttgtcggataa
DBGET
integrated database retrieval system
