Heterobasidion irregulare: HETIRDRAFT_155391
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Entry
HETIRDRAFT_155391 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12602
WD repeat-containing protein 61
Organism
hir
Heterobasidion irregulare
Pathway
hir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HETIRDRAFT_155391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_155391
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
HETIRDRAFT_155391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Tricorn_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_DCAF12
Tricorn_N
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_WDR11_2nd
eIF2A
Beta-prop_Nup120_160
Beta-prop_HPS5
B-prop_COPA_B_2nd
WDR54
Beta-prop_pof12
Beta-prop_IFT122_2nd
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
20667569
NCBI-ProteinID:
XP_009543895
JGI:
Hetan2_155391
UniProt:
W4KEM4
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MNEAWIESACEPTRHPKSHSDAVWDIAWTANDSVVSVSADGSLKQWDSDSGQVLRIPPTH
TLGLVSLSVSPSGKHALYNTIDGSTCLWDLESGEVVGQHEGYARGGTETTETAWSVSLDP
KGGSYASTGGSGNITIHSAQLDSFGQRLSTLSSGRNKFGMHCRYSPDGSRIALATESGQM
YVYDIQSSALIATYTSHAMAVRSLAWSPDSQFLLSASEDKRLVLHDIRSSSSSGKPGSGA
VASLSGHSSWVLSTDISPDGRLALSGSADKTIRVWDLSARAAVSVVQDTGEVWSVSWRPR
PSSNNSAGAFVSGGEDGLVRWWRAAGAS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcatggatcgagtctgcgtgcgaacctactcggcatccaaagtcacacagt
gatgctgtctgggacattgcttggacggcgaatgactccgtcgtctctgtctctgctgac
ggctccctcaaacaatgggactccgactcaggtcaggtcctccggatccccccaacgcat
accctcggccttgtttccttgtctgtctctccaagtggtaaacatgcactctacaacaca
atcgacggttcgacgtgtctttgggatttggagagcggggaagtcgtgggacaacacgaa
ggctacgcgcgcggcggaaccgagacgacagaaactgcatggtccgtgtccttggacccg
aaaggtggatcctatgcatctaccgggggttctggcaacatcactattcattctgcccag
ttggattcctttggccagcggctatccaccttatctagtgggcgcaacaaatttgggatg
cattgtcgatatagtccagatggctctcgcatagcactggccacggaatcaggccagatg
tacgtgtatgacatccaatccagtgcacttatagcaacctacacgtcgcacgctatggcc
gttcgctccctagcatggtcaccggattcgcagttcctactatcagcgtcagaagataaa
cggctggtcctacatgacattcgttcgtcgtcatcgtcagggaagcctgggtcgggcgcg
gtagcttctctgtctgggcattcatcttgggtgctcagtacggacatatcaccagatggg
cgattggctctatctggttccgctgataaaactataagggtatgggacctgtctgcccgc
gctgctgtctcggtcgttcaagacacaggtgaggtatggagcgtgtcatggaggccgcga
ccatcctccaataattcagcgggagcgttcgtgagcggaggcgaagatggtcttgtacga
tggtggagagccgcaggcgccagctga
DBGET
integrated database retrieval system