KEGG   Heterobasidion irregulare: HETIRDRAFT_155391
Entry
HETIRDRAFT_155391 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K12602  WD repeat-containing protein 61
Organism
hir  Heterobasidion irregulare
Pathway
hir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HETIRDRAFT_155391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_155391
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     HETIRDRAFT_155391
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Tricorn_2nd Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_WDR41 WD40_RFWD3 Beta-prop_DCAF12 Tricorn_N Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_WDR11_2nd eIF2A Beta-prop_Nup120_160 Beta-prop_HPS5 B-prop_COPA_B_2nd WDR54 Beta-prop_pof12 Beta-prop_IFT122_2nd Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 20667569
NCBI-ProteinID: XP_009543895
JGI: Hetan2_155391
UniProt: W4KEM4
LinkDB
Position
Unknown
AA seq 328 aa
MNEAWIESACEPTRHPKSHSDAVWDIAWTANDSVVSVSADGSLKQWDSDSGQVLRIPPTH
TLGLVSLSVSPSGKHALYNTIDGSTCLWDLESGEVVGQHEGYARGGTETTETAWSVSLDP
KGGSYASTGGSGNITIHSAQLDSFGQRLSTLSSGRNKFGMHCRYSPDGSRIALATESGQM
YVYDIQSSALIATYTSHAMAVRSLAWSPDSQFLLSASEDKRLVLHDIRSSSSSGKPGSGA
VASLSGHSSWVLSTDISPDGRLALSGSADKTIRVWDLSARAAVSVVQDTGEVWSVSWRPR
PSSNNSAGAFVSGGEDGLVRWWRAAGAS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaacgaagcatggatcgagtctgcgtgcgaacctactcggcatccaaagtcacacagt
gatgctgtctgggacattgcttggacggcgaatgactccgtcgtctctgtctctgctgac
ggctccctcaaacaatgggactccgactcaggtcaggtcctccggatccccccaacgcat
accctcggccttgtttccttgtctgtctctccaagtggtaaacatgcactctacaacaca
atcgacggttcgacgtgtctttgggatttggagagcggggaagtcgtgggacaacacgaa
ggctacgcgcgcggcggaaccgagacgacagaaactgcatggtccgtgtccttggacccg
aaaggtggatcctatgcatctaccgggggttctggcaacatcactattcattctgcccag
ttggattcctttggccagcggctatccaccttatctagtgggcgcaacaaatttgggatg
cattgtcgatatagtccagatggctctcgcatagcactggccacggaatcaggccagatg
tacgtgtatgacatccaatccagtgcacttatagcaacctacacgtcgcacgctatggcc
gttcgctccctagcatggtcaccggattcgcagttcctactatcagcgtcagaagataaa
cggctggtcctacatgacattcgttcgtcgtcatcgtcagggaagcctgggtcgggcgcg
gtagcttctctgtctgggcattcatcttgggtgctcagtacggacatatcaccagatggg
cgattggctctatctggttccgctgataaaactataagggtatgggacctgtctgcccgc
gctgctgtctcggtcgttcaagacacaggtgaggtatggagcgtgtcatggaggccgcga
ccatcctccaataattcagcgggagcgttcgtgagcggaggcgaagatggtcttgtacga
tggtggagagccgcaggcgccagctga

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