Heterobasidion irregulare: HETIRDRAFT_155948
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Entry
HETIRDRAFT_155948 CDS
T03455
Name
(RefSeq) AAA ATPase, CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hir
Heterobasidion irregulare
Pathway
hir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HETIRDRAFT_155948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_155948
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_155948
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_155948
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hir04147
]
HETIRDRAFT_155948
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HETIRDRAFT_155948
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HETIRDRAFT_155948
Membrane trafficking [BR:
hir04131
]
SNARE
SNARE associated proteins
Others
HETIRDRAFT_155948
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HETIRDRAFT_155948
Exosome [BR:
hir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HETIRDRAFT_155948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_5
AAA_16
CDC48_2
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
Parvo_NS1
Mg_chelatase
AAA_28
nSTAND3
AAA_7
ATPase
AAA_17
NPHP3_N
Vps4_C
IstB_IS21
DUF815
AAA_24
AAA_25
AAA_18
ResIII
ABC_tran
Sigma54_activat
TsaE
PhoH
NB-ARC
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
20667606
NCBI-ProteinID:
XP_009549120
JGI:
Hetan2_155948
UniProt:
W4JZD7
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MDPSGAASQNPDDISTAILRPKKSPNRLIVDEATSDDNSVATLNPVTMEALQLFRGDTII
VRGKKRRDTVLICLSSDDVEEGRIQINKVARNNLRVKLADLVNVHQCLDIKYGKRIHVLP
FDDSVEGLSGNIFDVYLKPYFLEAYRPVRKGDTFLVRGGMRTVEFKVMETDPAEYCIVAQ
DTVIHTEGDPVKREDEEANLSDVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPP
RGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKARSNVVVMAATNRPNSIDPALR
RFGRFDREVDIGIPDPTGRLEILRIHTKNMKLGDDVDLEQIAADTHGYVGSDLAALCSEA
AMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGTSNPSALRETVVEVPTVKWDD
VGGLDKVKQELQETVQYPVEHPEKFIKYGMQPSKGVLFYGPPGTGKTLLAKAIANETQAN
FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDSIAKARGGSSGDAGGAGD
RVLNQILTEMDGMNAKKNVFIIGATNRPDQIDPALLRPGRLDQLIYIPLPDEPSRLSILR
AALRKSPIDPGVDLPFLSKNTHGFSGADLTEICQRAAKLAIRESIESDIRRTREKKEKEE
AAGDDAKMEEDEEEEDPVPVITKEHFEEAMKYARRSVSDGDIRRYEMFAQNLQQSRSFGS
NFKFPESGSASADGSSAAQSSGNAAFVEDTQDDDLYA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggtgccgcgtcccagaacccagatgatatttcgaccgctatcttgcgg
cccaagaagtcgcctaaccgactcattgtcgatgaagcgacatctgatgacaactctgtc
gctaccttgaacccagtgactatggaggctcttcagctcttccgcggtgataccatcatc
gtcaggggcaagaagcggagagacaccgtcctcatttgtttgagctccgacgacgttgaa
gaagggcgtatccaaatcaacaaggttgcccggaataacctccgtgtcaagttggccgac
ctcgtcaatgtgcaccaatgccttgacatcaagtacggcaagcgcatacatgtactgccc
ttcgacgattccgtggagggccttagtggcaatatctttgatgtctacctgaagccttat
ttccttgaggcctaccgacccgtgcgcaagggcgacaccttcctcgtccgcggtggcatg
agaaccgttgagttcaaggtcatggagaccgatccggcagaatattgtattgtcgcgcag
gacacggtcatccatacagagggtgaccctgtcaagcgtgaagacgaggaggccaacctc
agtgatgttggttatgatgacatcggtggttgccgcaaacaaatggcacaaattcgtgaa
ctcgtcgagttaccgcttcggcatccacagcttttcaagtcgattggtatcaagccccct
cgcggtattctgatgtacggtcctcctggtacgggtaagacgctcatggctcgcgctgtg
gccaacgagactggcgcgttcttcttcttgatcaacggccccgaaatcatgagtaagatg
gccggtgagagtgagagtaacttgcgaaaagcatttgaagaggcggaaaagaactcccct
gctatcatcttcattgatgaaatcgactcgattgccccaaagcgtgaaaaaacgaacgga
gaagtcgagcgtcgtgttgtatcgcaattgctgaccttgatggacggtctcaaggctcgt
tcgaacgtagtcgttatggccgccactaaccgaccgaactccatcgaccccgctttgcgt
cgattcggccgattcgatcgtgaagttgatattggtatccctgatcccactggacgcctg
gagattctccgcatccacacgaagaacatgaaattaggggatgatgtcgatctcgagcag
atcgctgcggatacgcacggttatgttggttctgatctggctgcgctctgttcagaagcg
gccatgcagcagatccgtgagaagatggatctcattgatctggatgaggacaccattgat
gctgaagtgctcgactcgctcggtgtcactatggagaacttccgattcgctcttggtact
tccaacccatctgccctgcgcgagactgttgtcgaagtacctactgtcaagtgggacgat
gtcggtggtttggacaaggtcaagcaggagctccaggaaactgtacaataccctgtcgaa
catcccgagaagttcatcaagtacggtatgcagccgtcgaagggtgtgttattctacggt
cctcctggtactggtaagacccttctcgcgaaggcaattgcaaacgagacacaggcgaac
tttatctcgatcaagggtcccgaactgcttaccatgtggttcggtgagtctgaagcgaat
gttcgagatgtcttcgacaaggcccgtgctgccgccccctgtgtgatgttcttcgatgag
ttggactctattgctaaggcccgtgggggctcctctggcgatgctggtggtgcgggtgac
cgtgtcttgaaccagattttgactgagatggacggcatgaatgcgaagaaaaatgtgttc
atcattggggccacgaaccgaccggaccagattgaccccgcgctcctccgtcctggtcgt
ctcgaccagctcatctacatccctctccccgacgagccttctcgtttgtccatccttcgt
gccgcactccgcaagtctccgattgatcctggagttgacctccctttcctctcgaagaac
acgcatggcttctctggtgccgacttgacggaaatttgtcagcgtgcggcaaaacttgcg
attcgggagagtatcgagtccgacatccgccggacaagggaaaagaaggagaaggaggaa
gctgctggtgatgatgcaaagatggaggaggacgaagaagaggaagatcctgtccccgtc
atcactaaagagcacttcgaggaagcgatgaagtatgctcgtcgttcagtgtccgacggc
gatatcaggcgttacgagatgttcgcacagaacttacaacaatcccgatcgttcggctcg
aacttcaaattcccagagagtgggtcagcttctgcggacggctcatctgctgcacagagc
agtggcaacgctgcattcgtggaagatacacaggacgatgacttgtacgcctaa
DBGET
integrated database retrieval system
