Heterobasidion irregulare: HETIRDRAFT_156059
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Entry
HETIRDRAFT_156059 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_156059
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
HETIRDRAFT_156059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_RFWD3
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
WDR54
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_RIG_2nd
KNTC1_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
CFAP43_N
Beta-prop_SPT8
DUF1192
Beta-prop_IP5PC_F
TolA_bind_tri
WD40_alt
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
20667617
NCBI-ProteinID:
XP_009549384
JGI:
Hetan2_156059
UniProt:
W4JZX1
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MQLQEVIICGSASSTSTAGSGAVTFHDIQTGSSLASFKQTSSASHCTAVVNTRDGQGGFI
LAAQPDKTILNMYSFQKDQIALKIVLPERLSCISVDNQGTFCAGGTAQGRIYLWEIASGI
LFNSWEAHYRQISVLRFSHDGTALFSGSEDSGVSVWSVSRLVDDDLQSELPTSYTQLSDH
TLPITDIVCGVGSFPSCRLLTASVDHSVKLWDLSSKTLLTTFHFPHAIACIAWDVTERLF
FAASTDGSIHQVNLFSVREDKTGGRITEAVGGAGVSDIIRIGDQDPREAKKRLISIGEPV
TTLKISLTTSLLLVGTSTGLINIYDIPSRQLLRSITTHGGFGITYLDTMIKPPDLVGHVS
LSLSVGGEKGGEMPVRPVMPFQRMREAKAREAHEVTMLLPVQNKPTLESVTTYSSEELLR
DYAVFVQPVSDDAPTVSLQSRVAELEDEVLRLRGQLDRAKEVNDVIWQTVVQKSSRPDDV
SNSSKAV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttcaagaagtcattatctgtggatctgcgtcatcgacgagcacagcgggatcc
ggggccgtcacttttcacgatattcagacgggcagttctctcgcctcctttaaacaaaca
agctctgcgtctcactgcaccgcagtagtcaacacaagagatggtcaaggcggattcata
ctcgcagctcagccagacaaaacgatcctgaacatgtatagctttcaaaaagatcaaata
gccctcaaaatcgtacttccagaacgcttgtcatgtatctcagtcgataatcaagggacg
ttctgcgctggaggcaccgcacagggtcggatctatctatgggagatcgcctccggaatt
ctttttaattcatgggaagctcactatcggcagatatctgtcctccgcttttcacatgac
ggcaccgcgttgttttcgggcagtgaggactccggcgtgagcgtttggtcagtgtcgaga
ctagttgacgatgaccttcaaagcgaactgccaacgtcatacactcaactttccgaccat
acactacccattaccgatattgtttgcggtgtcggcagcttcccgtcgtgccgtctcctc
acagcatcagtggaccattccgtcaagctttgggacttgtcgtcaaagacgctcctcacc
acgttccatttccctcatgccatcgcatgcattgcgtgggacgtcaccgaacggctattt
ttcgcagcatctacggatggttcgatacaccaagtcaacttgttcagcgtgcgcgaagac
aagacaggcggaagaatcacagaggcggtcggtggggctggagtcagcgatatcattaga
attggagatcaagatcctcgagaggctaaaaagcgtttgatcagtattggagaaccggtg
acaactctcaagatctcactcacgacgtctttgctcctggtcggcacctcaacgggcctc
atcaatatctacgacattccttcccgccagctcctccgcagtatcacgacacacggcggc
ttcggtatcacatacttggacacgatgatcaaaccgccagacttggtggggcacgtcagc
ctgagcctgagcgttggtggtgagaagggcggcgaaatgcccgttcgacctgtcatgccc
ttccaacggatgcgcgaagcgaaagcaagagaggcacacgaggtcacgatgctcctgcct
gtccagaataagccaacgctggaatcagtgactacatattcttccgaggaactcctccgt
gattatgctgtctttgtgcaaccagtatccgatgacgcgcctactgtatcgttacaatct
cgcgtggcagagctcgaggacgaggttttacgtcttcgtgggcagctcgaccgtgccaaa
gaagtgaacgacgttatctggcagactgtggtgcaaaagtcttctcgtcctgacgacgtc
tcgaactcatcgaaggctgtttga
DBGET
integrated database retrieval system