Heterobasidion irregulare: HETIRDRAFT_156780
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Entry
HETIRDRAFT_156780 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_156780
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_156780
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HETIRDRAFT_156780
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
HETIRDRAFT_156780
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
HETIRDRAFT_156780
microRNA pathway
RISC loading complex
HETIRDRAFT_156780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
20667668
NCBI-ProteinID:
XP_009551561
JGI:
Hetan2_156780
UniProt:
W4JUV8
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MREFGVTVVGQMTIIPARELPPPSVTYRQGTPKVANGGWNILNVKFHAGGNLTNWKVLVV
REQGRGFSGPNDPAMTGLLHAFSNKCKDSGMTVPTGPPEIVPTPVLPSRSEDPGRQRALG
MIEESILQFGTGRISIIVVLLAERDDFIYPGIKRMAAVRFGIQTQCMLLKNALKDPSKQD
QYLSNVALKVNTKLGGINHRLDPRAMSWLTQKKTMMVGIDVTHPGPSSASGTPSIAGVVA
SIDNDFVQFPASLRLQKSKQEGIAELATMMIERLQLFRKHSKSLPDRVLVFRDGVSEGQF
DKVLRDELPQIIEAFKRIDPNNPRYRPSLSITICGKRHHARFPATDVSSADRNGNTRPGT
VVDKGITSIFDFDFYLQAHAGLQGTVRPTHYSVIYDENRLGADEIQQGVHATSYLYARAT
KAVSLIPAAYYADVVCEQARYWIHGFLNQGGDASSTGGESSAATRGRGGAAGRGGRGGSE
RMTQARDAAELRVYQAAERMWGNGLHNNLKDTMFYL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagttcggtgtgaccgttgtcgggcagatgaccatcattcctgctcgggaatta
cctccgccgagcgtgacgtatcgacagggaacaccaaaggtggctaatggaggatggaat
attctcaatgtcaagttccacgccggcggcaatctcacgaactggaaagttcttgttgtc
cgagaacaaggaagaggcttttccggtcccaatgaccctgccatgacaggtctactgcat
gcattttctaacaaatgcaaggatagtggaatgacagtgccaactggaccgcctgaaatt
gttcctacgcctgtgttgccatcgaggtcggaagatcctgggagacagcgtgcattgggc
atgatagaggaatcaatcttgcagtttggcaccgggagaatcagtatcatcgtggttctc
cttgcggagagggacgattttatctatccaggcatcaaacgcatggctgccgtccgtttt
gggattcaaactcaatgcatgttgctcaagaacgcgctgaaagaccccagcaaacaagac
cagtatctgtcaaacgtggcactcaaggtcaacaccaagcttggaggcattaatcatcgt
ctggatccgcgagcaatgagttggcttacgcagaagaagacgatgatggtcggcatagat
gtcacgcatccgggtcccagcagcgcgtctggaacgccgtctattgccggcgtcgtagct
agcatagacaacgatttcgtccagtttccggccagtttgaggttgcagaagtccaaacag
gagggtatcgcagagctggcgacgatgatgatcgagcgtctgcagctgttccgcaagcac
agcaaatctttgcccgatcgtgttctcgttttccgcgatggcgtatcagagggccaattc
gacaaagtgctcagagacgagctgccccagatcatcgaggcattcaaacgaatcgaccca
aacaacccgcgctatcgcccctctttatccatcaccatttgcgggaaacgccatcatgct
cgcttcccagcaacagatgtgagctcagctgaccgcaatgggaacacgcgtccggggacg
gtcgttgacaaaggcatcacgtccatatttgacttcgacttctaccttcaggcgcacgcg
ggtctgcaaggaaccgtgcgtccgacgcattactccgtcatatacgacgagaacaggttg
ggcgcggacgagattcagcagggcgtgcacgccacgtcgtatctctacgcgcgcgccacg
aaggcggtcagcctcattcccgccgcatattatgcagacgtggtatgcgagcaggcgcgg
tactggattcacgggtttttgaaccagggcggcgatgcgtcttccacgggtggggagagc
tcggctgcaacgaggggacgaggcggtgctgctggtcgcggcgggcgaggcgggagcgag
aggatgacccaagcgagggacgctgctgaacttcgcgtgtatcaggctgccgagaggatg
tggggcaatggcttgcacaataatctcaaggacaccatgttttatctgtga
DBGET
integrated database retrieval system
