Heterobasidion irregulare: HETIRDRAFT_157347
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Entry
HETIRDRAFT_157347 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
hir
Heterobasidion irregulare
Pathway
hir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HETIRDRAFT_157347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_157347
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HETIRDRAFT_157347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
20667719
NCBI-ProteinID:
XP_009549874
JGI:
Hetan2_157347
UniProt:
W4JWM9
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MAPKKNQESMKQKSLMSFFSKPSGNKSGEDNAKVPSMKPAAKSRPPAPRSSSPPADSDYG
NRTPASKGSSAIIVDASYTRSSDGGSSFKDTPPTSDPVDVDMKDIEAEPPKTNRKKRKIV
IDDSDDSMQELDSVAYKKGLSAYKPSPMPRKSSSKSQVKKARVSATPSADEGLDDDAEED
DEVVSSFSAKLTKFKKSPKKQTRKSRSEDDDFIVPSDEPLSDEEPARSSSRSSGRSSRLS
MITSDEEDGNDEAPAKSSNKSAKQKQKRPPLKKTSASNSNANANSFLTAAEQREQDKQIE
KKSQEDPFAFLVDPRDKDKVRPDEPGYDPRTLYIPRSAWDSFTPFEKQFWEIKQNHYDTL
YEEDARIGHREFDLKLTQRVKMSMVGVPESAFNFWAAKFLAKGFKVGRVDQAETALGAEM
RVAANKGKGKSSAADKQKEKIVRRELNKVYTNGTLVDEDLLTDEQAGHCVSIREFDEDER
GVDSANFGICVLDSATSEFNLSAFEDDVCKTRLETLLRQLRPKEILFTKGNLSVSTTRLL
KTVLPVTCLWTSLRDVEGFSYDKTLDELKLLYPADDGVDEDPEEEGLSGVPDAIRSMLSC
RTAIEALGSMIWYLRQLNIDKDILTMRNFNIYDPMKKGQGLVLDGQTLAHIEVLLNNEGT
EEGSLLQLLGRCITPFGKRLFRIWLCMPLREVTDINARLDAVEILMGNLQFESEFTAVAK
GLPDLERIVSRIHARNCRVKDFVNVLKAFGRLSNGLSTLAQSAECFESKTILGLLRSAPD
LTPNIENVQTMYKQEKDSDDLIPVEGKDEAYDEIIAEIKQLEQQLEKDLKKLQKEVGCPL
TYWHSATGTKAVARYTVPSLATNIRSLKEARETRNAAIKNFKFRLFDEFDQDRSVWLRAI
RVLAELDCLFSLAKASNALGEPACRPELVEGDTAWVEFEQLRHPALAVKTKNDFIPNDVR
LGGDAGRIALLTGIGKSTVMRMTAAGVIMAQLGMFVPAEKARLCPVDSILTRMGAYDNMF
SNASTFKVELDECCKILRDATPKSLVVLDELGRGTSTYDGMAIAGAVLHQLATHTLSLTF
FATHYGSLTDDFSYHPNIRTMHMETMVDDEKRELVFLYKLIEGVASGSFGTHVANLAGVP
ADVVQRAETVSKDFARQFKEKVEGKRKKAATARLPLVSQADFAYLHGLATGRLELDQNPV
RQREVLKGLKAAVLRALQEV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagaagaaccaagaatcaatgaagcagaaaagcctcatgagcttcttctca
aagccatctgggaacaagagcggcgaggacaatgccaaggtgcccagtatgaagccagca
gcgaagtcgagacccccagccccgcgttcttcgagcccacctgcagattctgactacggc
aaccgcacccctgcgtcaaaggggtcatctgcgattatcgttgacgcgagttatacgcgt
tcttctgatggaggcagcagcttcaaggacacgccgcctaccagtgaccctgtcgacgtg
gatatgaaagacatagaggcagaacccccgaagacgaaccgcaaaaaacgcaagatagtc
attgacgattcagatgacagtatgcaggagctagacagtgttgcgtataagaagggtcta
tcagcatataagccatctcctatgccccggaagtcgtcctctaagagtcaagtgaagaaa
gctcgcgtctctgcaactccttctgccgacgagggtctagatgacgatgcagaagaggat
gatgaggttgtctcgtctttctcggctaagctgaccaagttcaagaaatcaccaaagaag
caaactcgcaagtctcgctcggaagatgacgacttcattgtgccctctgatgagccactt
tctgacgaagaaccagctcgctcctcttctcgttcttcgggtcgttcatctcggctctct
atgattacttccgatgaagaagacggcaatgacgaagcaccggccaagtcgtctaacaag
tcagccaagcaaaagcaaaagcggccacctctgaagaaaacttcagcgtccaatagcaat
gcgaatgcgaacagctttctcactgcggccgaacaaagggaacaggacaagcagattgag
aagaaatcacaagaagatccattcgcctttttggttgacccacgcgacaaagataaagtt
agaccggatgagcctgggtacgatccacgaacgctgtatatcccacggagcgcttgggat
tctttcactccattcgagaaacaattctgggaaatcaagcagaatcattatgataccctc
tacgaagaggatgctcgtattggacatcgcgagttcgacctcaaactcactcaacgtgtc
aagatgtccatggttggtgtcccggaaagcgccttcaacttttgggctgcaaaattcctt
gcgaaaggcttcaaagtgggtcgggtggatcaggcggagacagccttgggcgcggagatg
cgtgtcgcggctaacaagggtaaggggaaatccagcgctgcagataagcaaaaggaaaag
atcgtcaggcgagagctcaataaagtatacacgaatggtacacttgtcgacgaagatctc
cttacggacgagcaagctggtcattgcgtctccatccgggagttcgacgaagacgagagg
ggagtcgatagcgcaaactttggtatctgcgtgctagacagtgcgacgagtgagttcaac
ttgagcgcattcgaagatgacgtttgtaagacgaggttggagacgttgctgcggcagctg
aggccgaaggagattttattcacgaagggcaacttgtcagtatccacgacacggttgctc
aagactgtccttcctgtgacgtgcctttggactagcttgcgagacgtcgaagggtttagc
tatgacaagacactagacgaactaaagttactttaccctgccgatgatggggtagatgag
gatccagaagaggaaggactcagtggtgtgccagacgccatcagaagcatgcttagctgt
cgaacggctatcgaagcacttgggtcgatgatatggtaccttcgccaactgaatatcgac
aaggacatacttacgatgagaaatttcaacatctatgatccgatgaaaaaaggccagggc
ttagtgctcgatggacaaacgctggctcatatcgaggtgttgttaaacaatgagggcacg
gaggaggggtccttgctacagttactcggcagatgcatcacgccttttggtaagaggttg
ttccgaatctggttgtgtatgccgttgcgagaggtgacagatatcaatgctcgacttgat
gctgtggaaatcttgatgggaaatcttcagttcgaatccgaattcacagcagttgcgaag
ggtctccccgatcttgaacgcatagtctcgcgtattcatgctagaaattgcagagtcaag
gactttgtgaacgtcctcaaggcgtttggaaggctcagcaatgggctgagtaccctagcg
cagtcggcagagtgtttcgagtctaaaacaattttgggactcctgaggtccgcacctgat
ttgacacccaacatcgagaacgtgcaaacgatgtataagcaagaaaaagattcggatgat
ctcataccagttgagggcaaagacgaggcgtacgatgaaatcatagcagagattaaacaa
ttggagcaacagttagagaaggacttgaaaaagttgcagaaggaggtcggttgcccgtta
acatactggcatagtgctacgggaaccaaggctgtagcgcggtacaccgtcccctccctt
gccacaaatatccgaagcctcaaagaagcgcgtgaaacccgcaatgccgcaatcaaaaac
ttcaagtttaggcttttcgacgagtttgatcaggatcgtagtgtctggctacgagcgatc
cgtgtgctcgcagaactcgattgcctgttcagtttggccaaggcttccaatgcgctcggc
gagccggcttgcaggcctgagcttgttgaaggagataccgcctgggtagagttcgagcag
ttaaggcacccagctttggcagtgaagacgaagaacgatttcattccaaatgatgtccga
ctcggtggtgatgcaggaagaatcgcattgttgaccggtataggcaagtctactgtcatg
cgcatgacagccgccggtgttatcatggcacagctagggatgttcgttccagcggagaaa
gcgcgcctttgcccagttgactcaattctcactcgaatgggtgcatacgataacatgttc
tccaacgccagcacgttcaaggttgaactagatgagtgttgcaagatccttcgtgatgcg
actccgaagtctctggttgtcttggatgaattgggacgaggcacgtcgacctatgacggg
atggcaatcgcaggggctgttctgcaccaactggcaacgcatacactttcgctgaccttt
tttgccacacactatggctccctcacggacgacttttcttatcaccctaacatcaggacc
atgcacatggagacgatggtagatgatgagaaacgggagctggtcttcctgtacaagctc
atcgaaggcgtcgcgtcggggtccttcggtacccatgtcgccaacctcgctggcgtgcct
gcggacgtcgtccaacgcgccgaaaccgtctcgaaggacttcgcacgtcagttcaaagaa
aaggtggagggaaaacggaagaaagctgccaccgcgcgattgcccttggtttcccaggcc
gacttcgcttacctccacggtttggcgacgggcaggctagagttggatcaaaaccctgtc
aggcagcgagaggtgctcaagggtttgaaggccgctgtcttgagagccttgcaggaagtg
tga
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