Heterobasidion irregulare: HETIRDRAFT_162529
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Entry
HETIRDRAFT_162529 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_162529
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_162529
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
HETIRDRAFT_162529
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HETIRDRAFT_162529
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
HETIRDRAFT_162529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
MOV-10_beta-barrel
AAA_11
AAA_19
AAA_30
T2SSE
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
20667778
NCBI-ProteinID:
XP_009552021
JGI:
Hetan2_162529
UniProt:
W4JQE6
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MIRHRYKVIPTLLTLIRCASRRLGPRCDLLRDWIFVIYPSFSSYRVGACGRIYSTDSGAT
GLLAFGFASITIVVVRSEHPAFALITACRHRFFTADSQSHHHLELIHRRCRLPHRHGSTQ
YVSGISKAFHCPACDRNMKGAQHVTGRPLRSHNERRGAPADLQPEGAPVLPGHVRCELCD
IAVGDDLWASHVAGPAHKRRENLVAYKSAFDEAAKGKHGVTVSHDEYGVDFGIVEVQDAE
RGVSVELKVQMIDPSSRIKMMDLKLSSTTSPFATTSSFTSAAFGPSLLQNGRDSGVCVTF
QQALRGRYQDRLEITFEDLSLRQRFIIARALKVVVGSKADYEVLKPVAPYVPRKPVRRTP
ETEILSGDPPPVLTAIKWVATLPLALIPRLQRTVLPPSMNADTYSRHSKALLWTEEHRME
NDLQTYDMYNALLDRHGAYYYLRVPGLAERRPSVLTGDSIIVQSHGADRGKWFEGRVHFV
RREEVGLKFHNSFLSIDRDRLYYVRFRLNRIPLRRQHQALDTAMAPEHLLFPIQKHVHAR
ARDTINITPYNKIITNNSSQLDAVKAIINRPLGSVPFIVFGPPGTGKTITIVESILQVLR
ANTEACAPSNSAADLIASKLISLELRSSFASMLPVEIKKMSQMTCSRLQAPTAAAISLCL
ECYFCDDTGRCPIWRRTLCCLEIRSSLDLSFDPLSRDTFSYLERLMNRDIYDLKKGHGMT
IVKLTKNHRSHNAILKYPNERFYSNELESCGDKGTVDSFLGSPLLVSSKFPVVFHAMSGK
DDREVSSPSFFNIEEVLQVEAYVQALRSERQFRVADQDIGIIAPYHAQCLKIRNSLRAFA
DGIKVGSVEGFQGQERRVIIVSTVRSSIDFVEYDLRHTLGFVANPCRFNVAITRAQALLI
VVGDPYVLSLDPLWRSFLNYVHIDKGWRGIPIPWDPLEPVRDNGGYGAELRELGLSDMNG
STRRMESLTLGSIDDIDEAGANVGRPWREAE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgataagacatagatataaagtcatacccactttgttaacccttattcgatgcgcctcg
aggcgtctaggtcctcgctgcgatctccttcgcgactggattttcgtaatctatccttcg
ttctcatcatatcgtgtgggcgcttgtgggcgcatatactcaacggactctggagccact
ggtctccttgcgtttgggtttgcctctatcacgatcgttgtcgttcgatccgagcatcca
gcttttgcgctaatcacagcgtgtcgacaccgattttttactgctgactcacaaagtcat
catcacctcgagctgattcatcgacgctgccggttacctcatcggcatggctcaacgcaa
tatgtatccggaatatccaaagccttccattgtccggcctgcgaccgcaacatgaaggga
gcacagcatgtcactggtagacctctccgctcgcataatgagcgaaggggtgcaccagcc
gacctgcagccggagggggctccggttcttcctggacatgtccgctgcgagctgtgtgac
attgccgtcggcgacgacctctgggcgtcccacgtcgccgggcctgctcacaagcgacga
gagaacttggttgcttataagtctgcattcgatgaggctgctaagggcaagcatggagtg
acggtctctcatgatgaatatggtgttgattttggtatcgtggaagtgcaggacgcagaa
agaggtgtgagtgtggagctcaaggtccagatgatcgatccttcgtccagaatcaaaatg
atggacctcaaattatcttcaaccacgtctccttttgcaaccacgtcttccttcacatca
gcggctttcggtccttctctcttgcagaatggtcgtgactctggtgtatgtgtcacattc
cagcaagctttgcgcgggcgctatcaagaccggctcgaaattactttcgaagatctcagc
cttcgtcagcgttttataatcgctcgggcactcaaggtcgtcgtaggaagcaaggcagat
tatgaggttctcaagcccgttgctccctatgtgcctcggaagcccgtcaggcgcacaccg
gagactgagattctgtcaggcgatccgccacccgtccttactgcaataaagtgggtcgcc
acgctcccgttggcgctgataccaaggctccagagaaccgtgttgccaccatccatgaac
gcagatacttactctcgtcactctaaggccctgctttggactgaagaacaccgaatggaa
aatgacctccagacctacgatatgtacaacgctctgcttgaccgacatggcgcatattac
tatttgagagttccagggcttgcagaaaggcgtccaagtgtcctgacgggcgattctatc
attgttcaaagtcatggcgcggatcgagggaaatggtttgaaggccgcgttcacttcgtt
cgacgagaggaagttggactcaagttccacaactcgtttttgagcattgatagggaccgg
ctttattatgtgcgcttcagattgaacagaatcccattgcgacggcagcaccaggctcta
gatacagcaatggctccagaacacttgctgtttcctatccagaaacatgttcatgcgagg
gcacgcgacacaatcaatatcactccgtacaacaagatcatcaccaacaattcttctcag
ctagacgctgtgaaggccatcataaatcgcccactaggctccgttcccttcattgttttt
ggcccgccaggaacaggcaaaaccatcaccatcgtggaatccatccttcaagttttgcgt
gctaacaccgaagcatgtgcaccaagcaactctgccgctgatcttatagcaagcaaactc
atctccttggaactgagaagctctttcgcttctatgctcccagtcgagataaagaagatg
tcccagatgacttgctcccgtttacaagcaccaacagcggcggccatttctctatgcctc
gaatgctatttctgcgacgatacaggacgatgtccgatttggagacgaacgttgtgctgt
ctggagatccgaagcagcttggacctatcattcgatccgctgtcgcgcgacaccttcagc
tatttggaaaggctcatgaatcgggatatctatgacctgaagaagggtcatggaatgacg
attgtgaaattgaccaagaatcatcgttcgcacaatgccattctcaaatatcccaacgaa
cgtttctattccaatgaattagagtcgtgcggcgacaagggcacggtagattcttttctt
ggcagccctctacttgtttccagcaagtttccagtcgtctttcatgccatgtcaggcaaa
gatgatcgggaggtgtcgtctccctcgttcttcaacatcgaagaggttttacaagtcgaa
gcttacgtccaggctttgcgctctgagagacaatttcgcgtcgcggatcaagacatcggc
atcatagcgccttatcacgctcaatgcctgaaaatccgtaattctctcagggcatttgct
gatgggatcaaggtcgggagcgttgagggattccagggccaagagcgtcgcgtgatcatc
gtctccacggtgcgcagcagtatagactttgtcgagtatgatctcagacacacccttgga
tttgttgcaaatccctgtcgtttcaatgtcgcgataacccgggcacaagctttgctcatc
gttgtcggtgatccttatgtcctttccctggatcccttatggcgctctttcttgaactat
gttcacatcgacaaaggatggaggggtattccaatcccatgggacccgctggagcccgtt
cgggacaacggcggctatggtgctgagctgcgcgagcttggcctatctgacatgaatggt
tccactcgtaggatggaatcgttgactctggggagcatcgatgatattgacgaggccggg
gcaaatgtcggtagaccttggagggaggccgaatga
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integrated database retrieval system
