Heterobasidion irregulare: HETIRDRAFT_164342
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Entry
HETIRDRAFT_164342 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
hir
Heterobasidion irregulare
Pathway
hir03022
Basal transcription factors
hir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HETIRDRAFT_164342
09124 Replication and repair
03420 Nucleotide excision repair
HETIRDRAFT_164342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_164342
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_164342
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HETIRDRAFT_164342
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HETIRDRAFT_164342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
NLS_NINJA_AFP
Motif
Other DBs
NCBI-GeneID:
20667910
NCBI-ProteinID:
XP_009552935
JGI:
Hetan2_164342
UniProt:
W4JR14
LinkDB
All DBs
Position
Unknown
AA seq
64 aa
AA seq
DB search
MKAIRGVLFSCDSAVKQILLSMNEKQSFIIEDLDDFHVLIKADEEWRVRKELEAELEKNT
YSLE
NT seq
195 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatccgaggcgtccttttcagttgtgactcggcagtaaagcaaattctactt
tccatgaacgagaagcagagtttcatcattgaggacttggatgatttccatgttcttatc
aaggcagatgaggagtggagggttaggaaggaactcgaagctgagctggagaagaatacg
tacagtttagagtga
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integrated database retrieval system