KEGG   Heterobasidion irregulare: HETIRDRAFT_164342
Entry
HETIRDRAFT_164342 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
hir  Heterobasidion irregulare
Pathway
hir03022  Basal transcription factors
hir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HETIRDRAFT_164342
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_164342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_164342
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_164342
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HETIRDRAFT_164342
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HETIRDRAFT_164342
SSDB
Motif
Pfam: Tfb5 NLS_NINJA_AFP
Other DBs
NCBI-GeneID: 20667910
NCBI-ProteinID: XP_009552935
JGI: Hetan2_164342
UniProt: W4JR14
LinkDB
Position
Unknown
AA seq 64 aa
MKAIRGVLFSCDSAVKQILLSMNEKQSFIIEDLDDFHVLIKADEEWRVRKELEAELEKNT
YSLE
NT seq 195 nt   +upstreamnt  +downstreamnt
atgaaggctatccgaggcgtccttttcagttgtgactcggcagtaaagcaaattctactt
tccatgaacgagaagcagagtttcatcattgaggacttggatgatttccatgttcttatc
aaggcagatgaggagtggagggttaggaaggaactcgaagctgagctggagaagaatacg
tacagtttagagtga

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