Heterobasidion irregulare: HETIRDRAFT_173988
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Entry
HETIRDRAFT_173988 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
hir
Heterobasidion irregulare
Pathway
hir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
HETIRDRAFT_173988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_173988
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
HETIRDRAFT_173988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
PHD_NSD
RH_dom
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
20668479
NCBI-ProteinID:
XP_009550886
JGI:
Hetan2_173988
UniProt:
W4JWX6
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MATKRSKSSLRFHQFPQFYACYLLKSIRTPRSTATYIGSTPSPPRRIRQHNGEITQGAWK
TKHNRPWVMHMIVYGFPSKLAALQFEWAWQHPHISRHLRDESGGALFRRSKYLKMSIQVA
RTMIACRPYNTWPLHVKLFTEDAVKIWKDVDKDVGARALPLPAGFTIQIELEGVDGKSGR
SGSGRDGPIDVSDAAFTTAHLAKHDVLLTSGRHLRCSVCRKPLTTYSTDPLTTALCSSTE
CNAVSHLSCLSQHFLASQGGIGMIPRGGRCLTCQSYTLWGDIIKGCYRRYAGKAVPDDDG
VDEEEEDAFGSEPGNESLSDTPVTPRRHKAPQVRAVRRAAATSASGDEGNHLNLGPRSGA
LLGPSNQVSGRQLKGPKARYHTDIERTSSDEEFFDLNAISEDDRAPSAPAFNPPASTSYK
IPPSKKNSTKQTRMRHQSSATDMPRNFRGTTDSTHHFPARHFNSEKGDYTASALSAPEPR
SPCTIAQSLKTFPMLPPLHSPLGSVSPRSSRSMQVMLTGNDNSDVAAFKKFDSRSPDHDW
HDPMTIPCSSDDEVGQQSNLGELFSTARALSSLSISSAAPCPLLHASLMDDDLDCDNSGG
INGKQDEVEVIELSD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaagaggtccaagtcatctctgagatttcaccaattcccacaattctatgct
tgctatctacttaaatctattcgtaccccgagatccacagcaacatatatagggagtacg
cctagcccccctcgtcggatacgtcaacacaatggggagatcacccagggtgcttggaaa
actaaacataaccgcccttgggtcatgcatatgatagtctatgggttcccatccaagcta
gcggcacttcaatttgaatgggcgtggcaacatcctcacatctctcgccaccttcgcgat
gaaagtggaggggccttgttcagacggtcaaaatacctcaaaatgagcatccaagtcgct
cgtactatgatcgcgtgtaggccctacaacacatggccgctccacgtgaagctctttaca
gaggatgctgtcaaaatctggaaagacgtggacaaagacgtgggcgcgcgcgcactgcct
ctgcctgcaggctttacaattcaaatagaactcgaaggcgtcgacgggaagtcaggcaga
tcaggttccggcagggatgggccaatcgacgtgtctgatgcggcgttcacaactgcccat
ttagctaaacacgacgttctcttaacttcggggagacatctgcgctgttcggtgtgtcgg
aagccgttgactacatactctacggacccactcacaactgcgctatgttcatcaacagaa
tgcaatgctgtttctcatctcagctgtctgtctcagcattttctcgcgtcacaaggtggc
ataggcatgatcccgcgaggtggaagatgtctaacttgccagtcgtatactctttgggga
gatatcatcaaaggttgctatcgaagatacgccggtaaagctgttcctgatgatgatggt
gtggatgaggaagaggaagatgcattcgggtctgaaccagggaacgagtctctgtcagat
actccagttactccacgaaggcacaaggcaccccaggtgagagcagtcagacgggcagca
gccacttcagctagtggggatgagggcaatcatctcaacctcggtcctcgttccggtgca
ttattaggcccgtcgaatcaggtgtctggtcgacaactaaaagggccgaaggcaaggtat
catacggacatcgagcggacttcttcagacgaagaatttttcgatttgaatgctatcagc
gaagacgaccgtgcgccttccgcaccggcgttcaacccacccgctagcacatcctacaag
atcccaccatcgaagaaaaactcaaccaagcagacaagaatgcgtcaccagtcatctgca
actgacatgccccgaaattttcgtggaacaacagattcaactcatcattttcccgctcgt
cacttcaattccgaaaaaggcgactatactgcttctgcgctctctgctcccgaaccgcgt
tccccgtgcactatagcacaatcgttgaaaaccttccctatgctgccgccgttgcattct
cccctaggatctgtgtcacctcgaagctcgcgttcgatgcaagtgatgttgactggtaat
gacaattccgatgtagccgcatttaaaaaattcgactcacgctctccagatcatgactgg
catgaccccatgaccataccttgctcgagcgacgacgaggttggccaacaatctaatctg
ggggaacttttttctactgccagggccctgtcttcgctttctatttcttctgctgcgcct
tgtccgttattacacgcttcactgatggacgatgacctagactgtgacaacagcggtggt
attaatgggaagcaagatgaggttgaggtcatcgagctctccgactga
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