Heterobasidion irregulare: HETIRDRAFT_174466
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Entry
HETIRDRAFT_174466 CDS
T03455
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
hir
Heterobasidion irregulare
Pathway
hir00040
Pentose and glucuronate interconversions
hir01100
Metabolic pathways
Module
hir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HETIRDRAFT_174466
Enzymes [BR:
hir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
HETIRDRAFT_174466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
20668513
NCBI-ProteinID:
XP_009551306
JGI:
Hetan2_174466
UniProt:
W4JTF9
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MWTRAGRVEKKGHICTVIPSHDGGDDSAAIISAFEQCSVDASVVFLNTTYHIERVMKTTG
LRNVKVDLGGTLLWGTDIAYWTNHSLPLGYQNQSLAWEFGGDNILFTGNGHGTFDGNGQI
WYDYGNGVSNVAGRPINFVIRDTTNSVFEGIRFVQSQFWTMAIHTAENLLLENLYINSTS
STSAPTINTDGVDTFYANNITMRNWEVTCGDDNIALKANSSNILVQDSVFHGGNGVAIGS
IGQYPGVYEFIANFTAERVTAIGSTYAGYVKTWTGVEQNFPPNGGGGGLGYAKNITFRDF
TVTDLAQNVALITQCTSYSGATGECDTSMFQISDVVWGPIRGTLATDSVAAFQCSGAAPC
PGIALVGVDVATPNSSAQSVVCSNVVDPVGFECSTES
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtggacccgcgccggccgtgtcgagaagaagggtcatatttgcaccgtgatcccatct
catgacggtggtgacgactccgccgcgatcatctctgcgtttgagcagtgcagcgtcgac
gcatccgtcgtatttttgaacacgacgtatcacatcgaacgagtgatgaagaccacgggc
ctgcgcaacgtcaaagtggacttgggagggactttattgtggggaaccgacatcgcatat
tggacgaaccatagtctgccattgggttatcagaaccagtcccttgcttgggagtttggc
ggcgacaatatactgttcaccggcaatggccatgggacgtttgacggaaacggtcagatc
tggtacgactacggaaacggagtgtcgaatgtggccggtcgacctatcaatttcgtcatc
cgcgatacgacgaactccgtctttgagggtatccgcttcgtgcagagccagttctggacg
atggctatccacaccgccgagaacctgctgctggaaaacctgtacatcaacagcacgtcg
agcaccagcgcgccgacaatcaacaccgacggcgtggacacattctacgcgaacaacatc
accatgcgcaactgggaggtgacctgcggcgacgacaacatcgcgctcaaagccaactcg
tcgaacatactggtccaggactcagtgtttcacggcgggaacggcgtcgcgatcgggtcg
atcgggcagtacccgggcgtgtacgagttcatcgcgaactttacggcggagagggtgact
gcgatcggaagcacgtatgcggggtatgtgaagacctggacgggcgtcgaacagaacttt
ccgcctaacggcggtggaggcgggctcggctacgcgaaaaacatcacgtttcgcgatttc
accgtgaccgacctcgcgcagaacgtcgccctcatcacgcaatgcaccagctacagcggt
gcgactggcgaatgcgacacgtccatgttccagatctctgacgtcgtctggggtcctatc
cggggcaccctcgcgaccgactcggttgcggcgttccagtgcagtggagcagccccgtgt
cccggcatcgcgcttgtcggcgtcgacgtcgccacgcctaattcgtcggcgcagagtgtc
gtgtgtagtaatgtggtagatccggtggggttcgagtgttctacagagtcgtga
DBGET
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