Heterobasidion irregulare: HETIRDRAFT_181242
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Entry
HETIRDRAFT_181242 CDS
T03455
Name
(RefSeq) transcription elongation factor-like protein
KO
K11292
transcription elongation factor SPT6
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_181242
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_181242
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HETIRDRAFT_181242
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
HETIRDRAFT_181242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
HTH_44
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
SH2
HHH_9
HHH_3
S1
B12-binding
Motif
Other DBs
NCBI-GeneID:
20668599
NCBI-ProteinID:
XP_009542691
JGI:
Hetan2_181242
UniProt:
W4KLG3
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSSPLHEQDGVEALQKIMDPMQIDDQEEGTHPEHPPSDDSSEEPEEDAEEERRIREGFIV
DEEEEEEEDNSEEERRRRRKRRKRRHRRESDEEEGLEEDDLELLEENTGETFARNKNKLT
RLRRGRDSPPVASSSKRKAVVESSDDDLDGDDLEMPQVQDIQRIWDDAHQTGGRDEEEDL
DDFIDYDDEEEGVGGMDEEEREERRRERRRLEKERRKALGSRPELTGIDANAWDEIHEVF
GDGHDYDWALVDEDEDYREEQPKPEMNYQDVFEPSEIRARLLTEDDDLIRAQDIPERMQL
ATSSLSQSSTLSMHKPLTEDDLDEAATWVVTRLSRKERDWFRSDGQHFELLAHLVTAITF
ALRYLFIQEFEVPYIWAHKRDYITHFDESDIRTRVDLLSLDDLWRVYALGQKYRSLLERK
KSLESLYARLGVADEYFENEVRRSIDNVEIINDTTEWMGMKYKDHKKDSAFELHFHDDEE
HVDTKKRKMPSRISMYEVAKKSVVYKLSQGFGIKPHEIVMNFISSETAHFVEDQDLNPEA
YAEQFVDPDPTKAQPASEVLQRARMIIATELGKDPLLRQEIRKKFKTDAKVSVLPTDRGI
NKIDEHHPYFAFKYLYQKSVTDMLESSQWLHILAAEAEHLVTVNVFLPDDSKASFARRLE
EAFASDSYSDTAKAWNAERMRVVSETLDHHLIPAGAKWTREWLREEVEDIMAWRCGETLR
ERIDLAPFKTEDLEPGETPSVLAMSWGKGDPHKDAITLVFLDEAGRLREQTKVDNLSDTE
SRDEFFDLLRRRRPDVIAISGFSMATTKLSLRVKELIYPQAGDGMNVDSNETGGEFSKIS
VTYVLDDIARLYQHSKRAAEEFTSLTSIAKYCVGLARYIQSPLNEYAALGSDITTVSFEE
DHQQLIPKEKLLSSFERVLVDITNKVGVDVNRAVTDSYYQHLLPFICGLGPRKAQVLVKK
IAAMGGNLTSRDQFIRAGLLTTKIFLNAAGFLRISQETVGKAVKNRHEDLDMQDPLDSTR
IHPEDYDLARKMATDALELDEEDVHGEHPSHVVALIIEDADNVKKLDELNLDDFASSLME
SGGERKRHTLNVIRAELIKPFAEVRQPLRMPTEWEVLTTLSGETLRTLRVGLIVSVQVMR
VKDNFAAVRLDSGIEGVINSQYAADQQPENLNTVLQKRQTVPGVIIDVKLDLPHDHFLVE
LSSRPTDVQAGDSQFRRVKHDQAWNHSQHERDKELQARKKRAEVNKTRRVIKHPNFHNFN
SSQAEAYLDTQQRGDVVIRPSSKGNNHLAVTWKVDDKLYQHIDVVEPNADPTGQSIGSQL
IIDGKYEFSDLDELIVNHVQAMARRVEELMAFEKFKPGSEDELHLFLKNFVAANPSKSAY
GFGLNRKKPGHFSLCFLTNKNSTIHTWPVRVAPEAYYLFDTAATGVPELCNAFKVRQMHE
SQSLGGPGGGRTPYGGRTPGRTPAVSGMATPGHMSMRHVGRTPNPYGGQTVNPAAAGAAT
PAVYNGVSGFGMPTPTPFGYQTPSGFGQKTPASGAFGQPPGGMNPQRAAMIQNSSTWGAP
PAGGGW
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctccccttcacgaacaagacggcgtcgaggccctccagaagatcatggatccc
atgcagattgatgaccaggaggaaggtacccaccccgagcaccccccgtctgacgatagc
tctgaagagcccgaagaggatgccgaggaagaacggagaatccgagaagggttcatcgta
gacgaggaggaggaggaagaagaagacaacagcgaggaagagcgtcgtcggaggcgcaag
aggcgcaaaagacgtcaccgacgagagagcgacgaagaggaagggttagaagaagacgat
ctcgagcttcttgaagaaaacactggagagacatttgctcgcaacaagaacaaattaact
cgtttgcgaaggggtagagactcgccacccgtagcatcgtcctccaaacggaaagctgtt
gtcgaatcatcggatgatgacctcgacggggatgacctggagatgcctcaggttcaagat
attcagcgtatctgggacgacgcacaccaaactggaggtcgcgacgaggaagaggatctg
gacgatttcattgactatgatgacgaggaggagggcgtcggtggtatggatgaggaggaa
cgagaggaacgaagacgagagcgccgaaggcttgaaaaggaacgtaggaaagctctcggc
tctcgtcctgaacttacaggcattgacgcgaacgcgtgggatgagatccacgaagttttc
ggcgatggtcatgattacgattgggcattggttgacgaggatgaagactatcgcgaagag
caaccgaagcctgaaatgaactatcaggacgttttcgaaccttctgaaattcgtgcccgt
cttctaaccgaagatgatgatctcattcgcgctcaggacataccagagcgaatgcaactc
gcgacgtcgtcattatcccaatcatcaacactgtcgatgcataagccattgacagaagat
gatttagacgaagcagcgacttgggttgtcacccgcctctctcgcaaagaacgagactgg
ttccggtctgatggtcaacacttcgaacttttagcgcaccttgtcaccgctatcacgttc
gctctccggtacctcttcatccaagaattcgaggtgccctacatctgggctcataaacgt
gactacatcacgcatttcgacgaaagcgacatccgcacacgtgtcgatttactcagtctc
gatgatctttggcgcgtctatgctcttggacaaaaatatcgttctctgcttgaacgcaag
aaatccttggagtcgctctatgctcggctgggcgtcgctgacgaatatttcgagaacgag
gtacggcggagcatcgacaacgtagaaatcatcaacgatacaaccgagtggatggggatg
aagtacaaggatcacaagaaagacagcgctttcgagttgcattttcatgacgatgaagaa
cacgttgacaccaaaaagcggaaaatgcctagtcggatatccatgtacgaggtcgccaag
aagagtgtcgtgtataaattgtcacagggtttcggtatcaagcctcatgaaatcgtcatg
aacttcatctcatctgaaacggcacattttgtcgaggatcaagatctaaatccagaagct
tatgccgaacagtttgtcgaccctgatcccacaaaggctcagccagcctcggaggtgctc
caacgtgctcgaatgattattgccacggaactgggcaaggaccctcttctgcgacaagaa
atccggaagaaattcaagactgacgccaaagtatcagtgcttcctaccgatcgagggatc
aacaagattgacgagcatcatccgtattttgcttttaagtatctatatcagaaatctgtc
acggacatgcttgaatcctcccagtggctgcacatccttgcggctgaagcagaacatctc
gtgaccgttaatgtcttccttcctgacgattccaaagcttcattcgctcggcgacttgag
gaagcgtttgcttcggatagctatagtgacaccgcgaaggcttggaatgctgaacgtatg
cgagtcgtatcggagacgctggatcatcatctgattcctgccggcgccaaatggacacgg
gaatggctcagggaagaggttgaggatatcatggcttggagatgtggagagacgttacgt
gagcgtatcgacctagcgccattcaagacagaagacttagaacctggtgagaccccatcg
gtcctagcgatgtcatggggcaaaggggatccacacaaagatgccattacactcgtcttt
cttgacgaggctggtcgtctacgtgaacagaccaaggtcgacaatcttagtgataccgaa
tctcgagatgagttctttgatctgctcagacgccgccgaccagacgtgattgctatcagc
ggattctccatggccacaacaaagttgtctctacgcgtcaaggagctaatttatccacag
gcaggcgacggcatgaacgttgatagcaacgagacaggcggtgaattctccaagatatct
gtcacttacgtccttgacgacattgctcgcctctatcaacacagcaagcgtgctgcagag
gaattcacttctctcacatctatcgcaaagtactgtgtgggtctagcgcgttatattcag
agtcccctcaatgagtacgccgcactcggatccgacataacgaccgtgtcgtttgaggaa
gatcatcaacagctcatcccgaaggagaagctgttgtcgtcattcgagcgtgttctcgtt
gacatcacgaacaaggttggggttgatgtcaaccgtgctgttacagactcgtactatcag
cacctcttgccattcatttgtggtctggggcctcgaaaagctcaagtactggtcaagaaa
atcgctgctatgggtggcaacctcacgagccgtgaccaatttatccgtgctggtctcctt
accacgaagattttcttgaacgcagccggtttccttcgcatctcacaggaaaccgttggt
aaggcggtcaagaatcgtcatgaggacttggacatgcaagaccccctcgacagtacccgt
atccaccccgaggattatgacttggcgcggaaaatggctacagatgctcttgagcttgac
gaggaagacgtacatggcgagcatccatcacacgttgtggctcttatcatcgaggatgcg
gataacgtcaagaagcttgacgagttgaacttggatgatttcgcgtccagtctcatggag
tctggaggcgagaggaagcgtcacacgctgaatgtcattcgcgccgagctaatcaaaccg
ttcgcggaagtgagacaaccattacgcatgcctacggaatgggaagtgttgacaacactg
tcgggagagacgttgcggacgttgcgggtcggactcatcgtctctgtccaggtcatgcga
gtcaaggataacttcgccgcagtccgacttgactccggtattgaaggtgtcatcaattcc
caatacgcagccgaccagcagccagaaaacctgaacactgttctgcagaagcgacaaaca
gtccccggagtgatcatcgacgtcaagctcgatctgccacatgaccactttcttgtagag
ctatcgtctcgacctacggacgtgcaggcgggggacagccaattccggcgtgtcaaacat
gaccaggcatggaatcactcacagcatgagcgggataaggaactgcaagcacgaaagaaa
cgtgcggaagtcaacaagacgcgccgggtcatcaagcaccccaacttccacaacttcaat
tcgtcacaggcggaggcatacctcgacacacaacagaggggtgacgttgttattcggcca
tcatccaagggcaacaaccaccttgcggtcacgtggaaagtggacgacaaactgtaccaa
cacatagatgtcgtcgagccgaatgcagacccgactggccagagcatcggcagccagctt
atcattgacggcaaatacgagttctcggatttggacgagttgatcgtcaaccatgtccag
gccatggcgcgacgtgtggaggaattgatggccttcgagaagttcaagcctggctcggaa
gacgagctgcatcttttccttaagaactttgtcgccgccaatccgtcgaagagcgcatat
ggcttcggtctgaaccggaagaagcccggtcatttcagcctgtgcttcctcacgaacaag
aactcgaccattcacacatggcctgttcgcgtcgcaccagaggcatactacctgtttgac
acggcggccacaggcgttccggagctatgcaacgcgttcaaagtgcgacagatgcacgag
tcacagagcctaggcggacccggcggaggtcgcacaccctacggcgggcgtactccaggt
cgcacaccggcagtatcggggatggcaacgccaggccacatgtcgatgcgtcatgtcgga
cggacgcccaacccttacggtggacagacagtgaaccccgccgcagcgggggctgcgaca
cccgccgtatataacggagtatccggatttggaatgccgacgccgacgccgttcggttac
cagacacccagcggatttggacagaagacgccagcgtctggggcgttcgggcagccgcca
ggcgggatgaacccacagagggcggcgatgattcaaaattcatcaacctggggagcgcct
cctgcaggcggcggatggtga
DBGET
integrated database retrieval system
