Heterobasidion irregulare: HETIRDRAFT_242765
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Entry
HETIRDRAFT_242765 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hir
Heterobasidion irregulare
Pathway
hir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HETIRDRAFT_242765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hir03000
]
HETIRDRAFT_242765
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_242765
Transcription factors [BR:
hir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HETIRDRAFT_242765
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HETIRDRAFT_242765
RNA polymerase III system
TFIIIB
HETIRDRAFT_242765
RNA polymerase I system
SL1/TIF-1B
HETIRDRAFT_242765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
20668950
NCBI-ProteinID:
XP_009542223
JGI:
Hetan2_242765
UniProt:
W4KHN1
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
LEQQHITAVEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKT
TALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIR
LEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIY
TVLCEFRKP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ctcgagcagcagcacatcaccgctgttgagggtatcgtgcccacccttcagaacattgtg
gcaacagtcaatcttgactgccgccttgacctcaagacgattgcactgcacgctcggaac
gccgagtacaatcccaagcgtttcgcagccgtcatcatgcgcattcgcgacccgaagacg
actgcgctcatcttcgcatcgggcaagatggtcgtcacgggtgcgaagtctgaagacgac
tcgcgtctcgcgtctcggaagtacgctcgcatcgtgcagaaactcggcttcgacgccaag
ttttccgagtttaagatacagaatattgtcggcagctgtgacgtcaaattcccgatccgt
ttagagggtcttgcgtacagtcacggacagtttagcagttatgagccagagctcttccct
ggtctcatctatcgcatgatcaagccgaaggtcgtgctcctgatctttgtatcaggcaag
atcgtgttgactggtgcaaaggtccgagaagagatctacacggcgttcaacacaatctac
actgtgctttgcgagttccgcaagccg
DBGET
integrated database retrieval system