Heterobasidion irregulare: HETIRDRAFT_244837
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Entry
HETIRDRAFT_244837 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_244837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_244837
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HETIRDRAFT_244837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Lebercilin
Fez1
Motif
Other DBs
NCBI-GeneID:
20669070
NCBI-ProteinID:
XP_009545985
JGI:
Hetan2_244837
UniProt:
W4K8E3
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
EPEVAPSESITDAAKSNLSLSIPEDVDFDLLSNLLPDVSLASPSSDEIISLYRLVVVQAT
DIDATQRDLEEARSELQKKDVELDQVLQDKESSSKEVESELETLQKELKYLKQERDQLLT
SQTSLQAQITTLSSSQSSSSTEVESLKRKVEDTEREKRDLVGIVSRLKEDSSQRDEEIQT
LRTNLKQARHDYQALESELREVRSTETSSKFKVDALTQQLQLAKDEAERATTELTTKSED
FAKHRQTKHSELAQLQSAHDALAQTHASTEGTLKALQSAHASQSKQLAQQLARVQELTGR
LAEQEGAFASEAAGLRRLVQVMEEREAQAKAIVEGIEAEWADVGARAERREAVLREEIAQ
ERRRAEDAEVRIEEMERVLEKVNRGEFPVPVAGSMTPATPARAGAGAAPDLLTQGMMGLS
PTVAMASRSQRSGKTFTEVYAEYVRLQEEHAHKTAEYDHMERTLGAVLAQIEERAPILAQ
QREEYERVQSEAAQLASQLAAALRDREAASTNAQETAQKLAQSGRENDLLQKQLNDLARQ
VQALLKEVGRKHDASLPSDDELEQDDTARPAENIEDVITNHLVLFRSIPALQAQNQKLLR
IVRELGAKMEAEEREYKDTLEREQNEAVREAHDAIRELQGRLESQRKSHEVTVQAYVKER
DALKSMLARTGGGAIAEPYVNGTGSGGVNGAAAERVASESREGVPESELARELAEIQSQF
DTYKMEMGVDSVRVRDELVKLQRENGQLGALLAKANAKIEYTAERHKMALEQYANQAEDL
RDMSVRLQELRDKYARADIECNRAIADVISANGKIEQLVNERANLRAEKRIWEGVQNRLL
EENKALSIERSHLSDLMGNVQKMHTDLERSGENDRRRLESQIQMLENQTQDLRSQLSQER
DSVRHLTLKKEIEVKELQARVDKQAQDLSHTRESLIGAQMSKTHLEERVAELSRQLQGNE
EKLAVYERRGSTSALANGDAQPGVSGADHLSKEQQLEAEVAELRAALKVTELDLTNARGH
VQQFQEISQANEAALASLNATYDDYKSSTESQLAKHESDYNALSENLRVVQQELTASREA
MAETKRTFDEERESWANDKRTLEDTLVELTTSEKHIAEDRTSHDAEIRQQEERAKSAEAK
YKNEVIAHGESLRDLESLKEQLSKLQAEARTHLAAAETAQAKLVSSESSWGQQREALDKE
IADLTARQELTEQNKVLHQHLDSVSSQAARIRQAADASSAPSGDAEPAGDVDEKLSDLRR
VIAYLRREKEIVDMQLELSKQENARLKLQVTRLSQDLEDTRATLSEERERAVAAVATDAQ
HAELVEKINQLTILRESNATLRADAESQGKRARALDAKLTALSAEIEPLREQVRMTQAEL
EGRQGHIQRLEEENKMWQQRSSQLLSKYDRIDPAEVQALKDEIERLKSEKAEFDVALSTR
DQQLQERQTYLTKDLQALQTQLKALGAERDAIKATPATDSSQHIVQELEKIRKEKASLTQ
ERDRLLAEKATWATATPAASVETSSKEWAAEKAELVKTRDEASTQAKKLKEEARNLSLAN
KKFQQRLQENQAARQRATAEHEAAIKAAVDKATSELQAAASSSSSDELIKKHTEELQALE
QRLRTKHQGELKAAVDAAVAKAKEQSSTTPATGEKAGAVNAKHQEEIAKAMESGRLEGQL
KMKMKDSQLVRAQSRVKALEAQIEQWKKSGLIPETMTTSPTAPTTQASASAPASASAPVA
PAPATNTAASAGRGAPRASAAAALPRKPSLASAAPLASGAPGRGRGQGAGRGLNIRGSAA
AASSEAGPSNQGGVSIIGAAGKRAREETGAPASDSLAKRLKPTDGSAPGTGGKPVT
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
gagcccgaggtcgcgcccagcgaatccatcaccgacgccgcaaagtccaacctctcgctc
tcgattcccgaagacgttgatttcgacctgctcagcaacttgctccccgacgtgtccctc
gcctcgcccagctccgacgagatcatctcactctatcgtctcgtcgtcgtccaggctacg
gacatcgacgccactcagcgcgacttggaggaggcgcgctcggagcttcagaagaaagac
gtcgagctcgaccaggtcttgcaggacaaggagtcgtcgtcgaaagaggtcgagtctgaa
ctagagacgctgcaaaaggagctgaaataccttaagcaggagcgcgaccaactgctgacc
tcgcaaacatccctccaagcgcaaatcacgacgctctccagctctcaatcctcgtcctcc
actgaagtcgagtcattgaagcgcaaagtcgaggacaccgaacgggagaagcgtgacctg
gtcggcatcgtcagccggttgaaagaggatagcagtcaacgcgatgaggaaatccaaacg
ctgcgcacgaacctcaaacaggcccgccacgactaccaagctctcgagagcgaactccgg
gaagtccgctcgacagagacatcctccaaattcaaggtcgacgccctcacgcagcagctc
cagctcgccaaagacgaggccgagcgtgcgaccacggagctcacgaccaagtccgaagac
ttcgcgaagcaccgccagacaaagcactccgagctcgcacagctgcagtccgcgcacgac
gcgctcgcacagacgcatgcttcgaccgagggcacgctcaaggcgctgcagtccgcgcac
gcatcgcagtcaaagcagctcgcccagcagctcgcgcgcgtacaggagctcacggggcgc
ctcgcggagcaggagggcgcgttcgcgagcgaggccgcgggtctgcggcggctcgtgcag
gtcatggaggagcgcgaggcgcaggccaaggcgattgtggagggcatcgaggcggagtgg
gcggacgtcggtgcgcgtgcggagcggcgcgaggctgtgctgcgggaggagatcgcgcag
gagcggcggcgcgcggaggacgcggaggtgcggatcgaggagatggagcgcgtgctggag
aaggtgaatcgcggggagttcccggtaccggtggcggggagcatgacgcccgcgacgcct
gcgcgcgcgggggcaggcgcggctcctgatttgctgacgcagggcatgatggggcttagc
ccgacagtcgcgatggcgagccggtcgcagcggtccggcaagacgtttacggaggtgtat
gcggagtacgtgcgcctccaggaggaacacgcgcacaagacggccgagtacgaccacatg
gagcgtacccttggtgcggtgctcgcccagatcgaagaacgggcgccgattttggcacag
cagcgcgaagagtacgagcgcgtgcagtcggaagccgcgcagctcgcgtcccagctcgcg
gcggcactgcgcgatcgcgaggcggcgtccacgaacgcgcaagagacggcgcagaagctc
gcgcagagcgggcgcgagaacgacctgctgcagaagcagctcaacgacctcgcacgccag
gtgcaggcgctgctgaaggaagtcgggcggaagcacgatgcgtccctcccatcggatgac
gagctcgagcaggacgacacggcgcgccccgcggagaacatcgaagacgtgatcacgaac
cacctcgtgctcttccgctcgatcccagcgctgcaggcgcagaaccagaagctgctgcgc
atcgtgcgcgagctgggcgcgaagatggaggcggaggagcgcgagtacaaggacacgctt
gagcgggagcagaacgaggccgtgcgggaggcgcacgatgcgattcgggagctgcaaggg
cggctggagagccagcggaagagccacgaggtgacagtgcaggcgtacgtgaaggagcgc
gacgctttgaagagcatgctcgcgcgcacaggaggcggcgccattgcggaaccgtacgtt
aatgggactgggagcgggggcgtgaacggggcggcggcggagagggtcgcatcggaatcg
cgggagggcgtgcccgagtcagagctggcgagggagctggcggagatccagagccagttt
gacacgtataagatggagatgggggtcgacagcgtgcgggtgcgggacgagctcgtgaag
ttgcagagggagaacgggcagctcggggcgttgctcgccaaggcgaacgcgaagatcgag
tacacggcggagcgccacaagatggcgctggagcagtacgcgaaccaggcggaggatttg
cgggatatgagtgtccggctgcaggagctgcgcgataagtacgcgcgagcggatatcgag
tgcaatcgcgcgatcgcggacgtgatcagtgcgaacgggaagatagagcagcttgtcaac
gagcgcgcgaatttgcgcgcggagaagcggatctgggagggcgtgcagaaccgcttactg
gaagagaacaaagcgctttcgattgagcggtcgcatctgtcggatctaatgggcaatgtg
cagaagatgcatacggatcttgagcgctcgggcgagaatgatagaaggcggctggagagt
cagatccagatgttggagaatcagacccaggaccttaggagccaacttagccaggaacgc
gatagcgttaggcatctgacgctgaagaaggagatcgaggttaaggagctgcaggcgcgc
gtcgacaagcaggcgcaggacctatcgcatacccgcgagtcgctgatcggcgctcaaatg
agcaaaacccatctcgaggaacgcgtcgcggagctttcacgccagctccagggcaacgaa
gagaagctggccgtgtacgagcggcgtgggtctactagcgctctggcgaacggtgacgca
cagccaggggtctctggcgccgatcatctgagcaaggagcagcaacttgaggctgaggtg
gcagaacttcgcgctgcgttgaaagttactgagctcgacctgacgaatgcgcgaggccat
gtgcagcagttccaagagatcagccaggcgaacgaagcggcgctagcgagcttgaatgcg
acctacgacgactacaagtcgtccacggaatcgcagctcgcgaagcacgagtccgactac
aacgctctgtcggagaacttgcgcgtcgtccagcaggagctgacggcgtctcgggaggcg
atggcggaaacgaaacgcacgtttgacgaggagcgagagtcatgggcgaacgacaagcgg
acgcttgaggataccctcgtcgagttgaccacgtcggagaagcatatcgcggaagatcgg
acgtcgcacgatgcggagattcggcagcaggaagagcgagccaagtctgccgaggctaag
tacaagaacgaagtcatcgctcatggcgagtcgcttcgggacctcgaaagcttgaaggag
cagttgtcgaagctgcaggccgaggcgaggacgcacctggccgccgcggagactgcccaa
gccaagttggtgtcgtccgaatctagctggggccagcagagagaggccctcgacaaggag
atcgctgatttgacagctaggcaagagttaacggagcagaacaaggtactccaccaacac
ttggactcggtcagttcgcaggctgcccgcatccgtcaagctgccgatgcaagttctgcg
ccgtctggggacgccgagcccgccggcgacgtagacgagaagctttctgatttgcgccgg
gtgatcgcatacttgcgcagagagaaggaaattgtcgatatgcagctcgagctgagcaag
caggagaatgctcgcttgaagctccaggtaacccgcctcagccaggacctcgaagacacc
agggccacgctttctgaggaacgtgaacgtgccgtcgccgcggttgcgaccgatgcacag
cacgcggaactggtggagaagatcaatcaactgaccatcctccgggagagcaacgcgacg
ttgcgcgcggatgccgaatctcaagggaagcgcgcccgggctctggacgccaagctcacg
gccttgtccgctgagatcgagcccttgcgggagcaggttcgcatgacgcaggctgagctg
gagggacgccagggccacattcagcgcctggaggaagagaacaaaatgtggcagcagcgt
agctctcagctgcttagcaagtatgatcgcatcgaccctgcagaggtgcaggccctcaag
gacgagatagagcgtctgaaatccgagaaggccgaattcgatgttgcgttgtctactcga
gaccagcagctgcaggagcgtcaaacatatctgaccaaggacctccaagccctacaaacg
caactgaaagctctcggtgccgagcgcgacgcgatcaaggctacgccggccaccgactct
tctcagcatattgttcaagagctggaaaagatccgaaaggagaaagcatctcttacgcag
gagcgggatcgcttgcttgccgaaaaggcgacttgggcgacagccaccccagcggcgtcg
gttgaaacatcatccaaggagtgggcggccgaaaaggctgagctcgtcaaaactcgtgac
gaagcttctacacaagcgaagaagctcaaggaggaagcgcgcaacttgagcttggccaat
aaaaaatttcagcagaggctccaggagaaccaagcagcccgtcaacgggctaccgccgag
cacgaggccgctatcaaggccgcagtcgataaggccacgagcgaattgcaagccgccgcc
tcatcctcatcgtctgatgagcttatcaaaaagcatacggaggagctccaggcactagag
caacgcctccgcacgaagcaccagggtgaattgaaggctgccgtcgatgctgcggttgct
aaagccaaagagcaatcctcaacaacgccagccactggagaaaaggccggagcggtcaat
gcgaagcaccaggaggagattgcgaaggcaatggagtctgggaggctggaagggcagttg
aagatgaagatgaaggacagtcagctggtgcgagcgcagtcgcgcgtcaaggcgctagag
gcgcagattgagcagtggaagaaaagcggtctcatcccggagacaatgaccacatctcct
actgcgccgacaacccaggcatctgcatccgcccctgcatctgcctctgcacctgtggca
cccgccccggctaccaatacggcggcatcggctgggcgaggcgcgcctcgagccagtgcg
gctgctgcccttccccgcaagccatcactcgcctccgccgcacctctagcctcaggggcg
cctggcagaggtcgcggtcagggcgctggtcgtggactcaacattcgcgggagcgccgct
gcagcttcctccgaggcaggtccctccaatcaaggcggtgtgtctatcataggtgctgcg
gggaagcgcgcgcgagaggaaaccggagcgcctgcgagcgactcgctcgcgaaacggctg
aagcccactgacggaagtgctcccgggaccggcggtaaaccagtgacg
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integrated database retrieval system
