Heterobasidion irregulare: HETIRDRAFT_307917
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Entry
HETIRDRAFT_307917 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_307917
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
90S particles
Other 90S particles
HETIRDRAFT_307917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
UTP6_C
TPR_21
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
20669536
NCBI-ProteinID:
XP_009541050
JGI:
Hetan2_307917
UniProt:
W4KN22
LinkDB
All DBs
Position
Unknown
AA seq
1477 aa
AA seq
DB search
MAAKKRQLEDTASVPKAKKTKVASEGKKEKKKAKPEHIPQPTAHITPEETDFPRGGGTSF
TPLEVKTIRAEAVKEANDELFKVRDVFTALTKIQKQRRKSDVKGKGKAVDSNGKSDVLRI
EHLNYKRVSVGMKLLAQIISTHPLGLIVSLPNQLVGHVPITQVSSELTQLLETMDMDDVE
DSESEDEEGKPSKVPDLFEIFQPEQYVRCIVTAVHAAGSTEGVSGIGRGRDEVEKASRRV
ELSLLPEQVNEGVAKADIKQGFTMSAAVKSIEDHGYILNLGIPDVSGFLSFKDAQKVFND
SSKLHIGRILDVSISKLSSNGRTCNVSIAPTTLRSASISEVTTVTSVLPGELVQCLITSM
TSLGLVVQVLGFFDGTLDEYHLPLGDPDEIFKMGQKVKARVLYEVPGKSPPRFALSLAEH
VVKLETKGANSGTKLQDVYPIGTVLDTVQVVKVETERGLVVSVQPNIRGFVHISHVSDDH
VPSLSASSGAWKLGSNNRARVTGYFPMDGLLQLSMRSSVLEQKFLQVADVQVGELIKGTI
KKLTGSALFVSMSGIVDGVVFPNHYADIILKHPQKRFKSGATLKCRVLTVDPERRRVTMT
AKKTLVESELPIITKFEEAKVGLITYAVIFRVAERRLQIEFFNNIKGSVPAKEASEESVG
SLSDAFTVGKPVKVRIIFIDPESHNIVASIRQAASNYEPVVADISGVEIGDTVEGDITEI
HKDNAVLTLKSTQIRALLSLKNLANLRSLPVAQLRGSLQVGEKLEGLVVVSRNTEKGIVI
VANKPKMKPALDNKQLLAIDSVQVGQVVGGRVLRHHRKGTLIKLSSQITGTLHPTDASDD
YETGSVFPGVDSIIKAAVLAVDKEKKHLTLSTRLSKLEPTSPTQIVDREISGLADLKTGE
SVRGFIKGVAEHGLFVTLSRDVDARVQIRELFDEYVKDWKSSFKVDQLVKGRILSVNLEK
KQVEMSFRSGDLSRSSKSSLNISDLQEGEKVEGRVKKIEDYGLFIEINGSKLTGLCHKSE
LSDNKEANVALALRSFREGDTVKAIVRSIDSEKKRISLGLKPSYFSEEDFEDKEDESGNE
EDVPEAFGVIDEDAEMSDAGGDEEGDADVLSESDEPSGDEEAMAVDIDLNSVALNKPSTS
STPSVPAPSLQLQGGFQWSGGDVQDEDESASSEESEDEDQSGKKKKKKRKEIELDLTADM
HTKTPESNTDFERLLLGSPNSSYLWIQYMSFQLQLSEIDKAREVAKRALQTISFREEKEK
LNVWMALLNLENVYGTDESLEAAFKDAARHNDSKTVHLRFASILEQSEKFEKAEEQHKRT
CKKFGQSSKVWTLCGEYYLRRGEPEEARKLLPRSLQSLEKRKHLKTISKFAQLEYKLGDP
ERGKTIFEGIVDSHPKRWDLWGVYMDMEASQKEIQSLRNLFDRVLAQKMTSHKAKSFFKK
WLELERRLGDEEGAAVVKQKAIEWTQRASHPAAEGES
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagaaacgccagttggaggacaccgcgtctgtccccaaggccaaaaagacc
aaggtcgcgtcggagggcaagaaagagaagaaaaaggcaaagccagagcacatccctcaa
ccaactgcccatataactcccgaagaaacagacttccctcgtggaggtgggaccagcttt
accccgctagaagtcaagactattcgtgcagaggcagtcaaggaggcgaacgatgaactg
ttcaaagtgcgtgacgttttcactgcgttgacgaaaatccagaagcagcgacggaaatca
gacgtgaagggtaagggaaaggctgttgatagtaatggaaagagcgacgttctgaggatc
gagcacttgaactacaagcgcgtttccgtaggcatgaaacttctcgctcaaatcatttcc
acacatcctctcggtctcatagtctcccttcctaatcaacttgttggtcacgtaccaata
acccaggtatcttcggaactcacacaactgctcgagaccatggatatggacgatgtcgag
gactccgagtccgaagatgaggagggcaagccatctaaagtgcctgatttattcgaaata
tttcaaccggaacagtacgtacgttgtattgttacggcagtgcatgctgcgggatctacg
gaaggtgtgtctggtatcggaaggggaagggatgaggttgaaaaggcgagtcggagggta
gagctgagccttctcccggaacaagtaaacgagggtgtggcgaaggcagatataaagcaa
ggcttcaccatgtcggcggctgtcaaaagcatcgaggaccatggatatatcctcaacctt
ggaattcccgacgtatcaggattcttgtccttcaaggacgctcaaaaagtcttcaacgac
tcctcaaaattacacatcggccgaatactcgacgtgtccatttcgaaattatcaagtaac
ggtcgtacgtgcaatgtatcaatagctcctactactctgcgttcagcttctatcagtgaa
gtcacgaccgttacctcggtactccccggcgagcttgttcaatgcctcatcacgtctatg
acttccttaggccttgtcgttcaagtcctaggcttctttgacggtactctagacgaatat
catcttcctcttggtgatccggatgaaatcttcaagatgggacagaaagtaaaagctcga
gtgctgtacgaggttccagggaaatcacctccgcgctttgctttatcgttagctgagcac
gtcgtgaaacttgaaacgaagggagcaaattctgggactaagttacaggacgtctatcct
ataggaacagtccttgatactgttcaggtggtgaaagtagagacagaacgcgggctagtg
gtttcagtgcagccaaacatccgtggatttgttcatatatctcatgtgtcggatgaccac
gttccctcgctttctgcttcttcgggtgcgtggaaactgggtagcaataatcgcgcgcga
gttactggatattttcctatggatggtctccttcagctctcgatgcgctcctcggttctt
gaacagaaattcctccaggtcgcggatgttcaagttggggaactcatcaagggcacgatc
aagaagttgacaggctctgcattatttgtctcaatgtcgggtatcgtcgacggcgtcgtc
tttcccaatcattatgcagacatcattctcaagcacccacagaagaggttcaaatctggc
gcaactttgaaatgccgagttctcactgtcgacccggagcgaagacgtgttactatgacg
gccaagaagacgctagtcgagtctgagctgccaatcatcacgaagttcgaagaggcgaag
gttgggcttatcacttatgctgtcatcttcagggtggccgaacgacgactgcaaatcgag
ttcttcaacaacatcaaggggtctgtcccagcgaaggaagcaagcgaggaatcagtaggc
tctctatcggacgctttcaccgttgggaaacccgtgaaggttcgtatcatcttcattgat
cctgagagccacaacattgtcgccagcattcgacaagcagcttcaaattacgagccagtc
gtcgccgatatcagtggggttgaaattggcgacaccgtcgaaggagacatcactgagatc
cacaaggacaacgcggtcctcacgctcaagtcgacacaaatccgggccttgctctctcta
aagaatctagccaatctgcgcagcttgccagtcgcacagctacgaggctcgcttcaggtc
ggtgaaaagctggaaggactagtcgtcgtatctcggaataccgagaagggcatagtcatt
gtcgccaacaaaccaaaaatgaaaccagccttggataataagcaacttttggccatcgac
tctgtacaagttgggcaggttgtcggcggtcgtgtccttcggcaccaccgcaaggggact
ctcatcaaactttcctctcaaatcacaggaacccttcatcccaccgatgcgtctgatgat
tacgagaccggctctgtgttccctggtgtcgactcgattatcaaagctgcggtactggct
gttgacaaggagaagaagcacctgacgttgtcgactcgtctgtcgaagctagagcccacc
tcgccaacccagattgtggatcgggagatctctggcttggcggatctgaagacaggagaa
agcgtccgtggattcatcaagggcgtggccgagcacgggttgttcgtcaccctcagtcga
gatgtggatgctcgtgtgcagatcagggagctgtttgatgagtacgtgaaggactggaag
agcagcttcaaagtagatcagcttgtgaaggggcgcattctgagcgtcaatctggagaaa
aaacaagtcgagatgtcctttcgttccggcgacctttcgcgatcatcgaaatcctcgttg
aacatctccgacctccaggagggcgaaaaagtcgaagggcgcgtcaagaagattgaggac
tacggactgtttattgagatcaacgggtcaaagttgaccgggttatgtcacaagtctgag
ctatccgacaacaaagaggcaaacgtcgcattggctcttcggagcttccgcgaaggcgat
accgtcaaggccatcgtacgctccatcgactcggagaagaagcgcatatctcttggcctg
aagccttcatatttctccgaagaagattttgaagataaggaggacgagtcgggcaatgag
gaagatgtacctgaggcatttggcgtcatcgatgaggacgctgagatgtctgatgccgga
ggcgacgaggagggcgacgctgatgtgctttccgagagtgacgagccctccggtgatgag
gaagcaatggctgtagacatcgatctcaactctgtggctctcaataagccttcgactagc
tcgacgcctagcgttcctgcaccttcccttcaactgcagggaggatttcaatggtccggc
ggcgacgttcaagacgaggacgagtctgcttcgtcagaggaaagcgaagacgaggaccag
tctggcaagaagaagaagaagaagcgcaaggagattgaactggacctcacggccgacatg
cacaccaagacgcccgagtccaataccgactttgaacgtctcctgctcgggtccccgaac
tcctcgtacctttggattcagtacatgtccttccagctccagctctctgagatcgacaag
gcgcgcgaggtcgccaagcgcgcgctccagacgatcagcttccgcgaagagaaggagaag
ctgaacgtgtggatggcgctactcaacttggagaacgtctacggcacggacgagtcgctc
gaggccgccttcaaggacgcggcgcggcacaacgactcgaagacggtgcacctccgcttt
gcatccatcctcgaacagtccgagaaattcgagaaagcagaggaacagcacaagcggacg
tgcaaaaagttcggccaaagctcaaaggtgtggacgctgtgcggcgagtactacctcagg
cgcggcgagccagaagaggcgcggaagctccttccccgcagcctgcagagcctagagaag
cgaaagcacctcaagaccatctccaagttcgcgcagctggagtacaagctcggcgacccc
gagcgcggcaagacgatcttcgagggcatcgtcgactcgcatccgaagcgatgggatctc
tggggcgtctacatggacatggaggcgtcgcaaaaggagatccagagcctgaggaacctc
ttcgatcgcgtcctcgcgcagaagatgacgagtcacaaagccaaatcgttcttcaaaaag
tggctcgagctcgagcgccgactcggagacgaagagggcgccgcggtcgtgaagcaaaag
gcgatcgagtggacgcagcgggcgagccacccggcggccgagggcgagagctag
DBGET
integrated database retrieval system
