KEGG   Heterobasidion irregulare: HETIRDRAFT_308387
Entry
HETIRDRAFT_308387 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
hir  Heterobasidion irregulare
Pathway
hir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HETIRDRAFT_308387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_308387
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HETIRDRAFT_308387
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HETIRDRAFT_308387
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 20669579
NCBI-ProteinID: XP_009541242
JGI: Hetan2_308387
UniProt: W4KND0
LinkDB
Position
Unknown
AA seq 185 aa
MASDCLLPGQPVPLPRGPLPQLGSGIYMKDGEPRASLVGIPRYDASTLAISRVRPHPPAP
NSIVLGSVTRLSPQQAVVSITVVDGMPLPAGEEFTGVIRVQDVRATEKDKVKIADCFRGG
DVVKGLVISLGDARSYYITTARNDLGVLFATSEAGATMEPVSWQEMRCARTGRIERRKCA
KPEGV
NT seq 558 nt   +upstreamnt  +downstreamnt
atggcctccgactgcttgctcccaggccagcccgtccctcttcctcgcgggcctctgcct
cagcttggcagcggcatctacatgaaagacggggagcctcgggcgagcctcgtcggcatt
ccgcgctacgatgcatctactctggctatctctcgtgtccgtccgcacccgccggctccg
aactccatagtgctcgggtctgtcacgcgtctctcgccgcagcaagcggtggtgtccatc
acggtggtggacgggatgccactccctgcgggagaggaattcacgggcgtgatccgcgtg
caggatgtgcgcgcaaccgaaaaggacaaggtaaagatcgccgactgttttcgaggcggg
gacgtggtgaaggggctcgttatctcgctcggcgacgcgcggagctactacatcacgacg
gcgcgcaacgacctcggtgtcctgttcgcgacgagcgaggcaggtgcgacgatggagcct
gtgtcgtggcaggagatgcggtgcgctcggacggggaggatcgagcggcggaagtgtgcg
aagcccgagggcgtgtga

DBGET integrated database retrieval system