Heterobasidion irregulare: HETIRDRAFT_308415
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Entry
HETIRDRAFT_308415 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HETIRDRAFT_308415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_308415
Enzymes [BR:
hir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HETIRDRAFT_308415
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HETIRDRAFT_308415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
20669583
NCBI-ProteinID:
XP_009541291
JGI:
Hetan2_308415
UniProt:
W4KNH8
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MSLKRKAGSNLTANSSQKKPKNDFFTPKSSTAVGSSSTPQFAFDRREAGTVRLSTWNVNG
IKSVNGKTLRKYLEAEDPDILLTETKVAQGKADIMSLKTRFKQCVSSIGSWWLTIAGTAV
LSKHKPFNVVVGLPTWPDSIEDTQGRYVQMEFENLYLVGTYVPNSGENFKSIDIKQKWNA
AFSEHLHGLNAIKPVIWAGDFNCIPTKKDLDNKAQAFWDKMSGLSATERREFEGIINPGE
QDSKRGKFVDIWRHLHPDAEEFTCVRRLCQTVTKFGAWRLDSFILSERILGNAKKCEIRH
ELKDLKLSDHWPVTLDILGLF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcaaacgaaaggcaggctccaatctgaccgccaattcgtctcagaaaaagcca
aagaatgatttcttcaccccaaagtcttcgaccgctgtaggctcttccagcacgccgcaa
ttcgcattcgatcgtagagaggcggggactgtccggctctcgacttggaatgtcaacggt
atcaagtctgtcaacgggaagacactcagaaaatatttggaggctgaagatccagacatc
cttcttacagaaaccaaagttgcccagggtaaagcggatatcatgtctttgaaaacgcgc
ttcaagcagtgcgtatcaagtattggctcatggtggttgactatagctgggacagcagtg
ctgtcgaaacataagcctttcaatgtcgtagtaggtctgcctacatggccagattctatt
gaagatacgcaggggcgctatgttcaaatggagttcgaaaacctgtaccttgttggtact
tatgtcccaaactctggagagaatttcaaatcgatagatatcaagcaaaagtggaacgcc
gcgttttccgagcaccttcatggcttgaatgccatcaaacccgtcatttgggcgggggat
ttcaactgtataccgacaaagaaagacttggacaacaaggcacaagccttctgggacaag
atgagcggattgtcagcaaccgaacgcagagaatttgaaggcattatcaatcccggcgag
caggattcgaaacgaggaaaattcgtcgacatatggagacatctgcacccagatgctgaa
gaattcacgtgcgtcaggcgtctatgccagactgttacaaaattcggtgcttggagactc
gactcgttcatcctctcggagcgcattctgggtaatgccaaaaagtgtgaaatccgccat
gagctgaaggacttgaagttatcagatcactggcctgtgacgctcgacatattaggcctc
ttttga
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